RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 MAPTP10636 758 aaKnown RBP16.42■□□□□ 0.22
VPS8-221ENST00000471655 YARSP54577 528 aaKnown RBP16.42■□□□□ 0.22
VPS8-221ENST00000471655 STRN3Q13033 797 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 ZNF568Q3ZCX4 644 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 DCLRE1AQ6PJP8 1040 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 HFE2Q6ZVN8 426 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 RIN2Q8WYP3 895 aaPredicted RBP16.42■□□□□ 0.22
VPS8-221ENST00000471655 PIK3R5Q8WYR1 880 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 RABGGTAQ92696 567 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 B3GALT6Q96L58 329 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 MFSD14AQ96MC6 490 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 TTPALQ9BTX7 342 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 KCNH6Q9H252 994 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 MAN1C1Q9NR34 630 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 LARSQ9P2J5 1176 aaKnown RBP16.42■□□□□ 0.22
VPS8-221ENST00000471655 CACNG4Q9UBN1 327 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 TRIOO75962 3097 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 SMIM28A0A1B0GU29 152 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
VPS8-221ENST00000471655 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 M0R296 226 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 TOM1L1O75674 476 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 PLA2G5P39877 138 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 SIGLEC14Q08ET2 396 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 RAD51AP2Q09MP3 1159 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 RTP2Q5QGT7 225 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 TDRD5Q8NAT2 981 aaKnown RBP16.41■□□□□ 0.22
VPS8-221ENST00000471655 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 BLOC1S4Q9NUP1 217 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 TECTAO75443 2155 aa16.41■□□□□ 0.22
VPS8-221ENST00000471655 PLXNA3P51805 1871 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 DENND4AQ7Z401 1863 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 CCDC195A0A1B0GUA6 201 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 TGM5O43548 720 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 KCNE1P15382 129 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 SYT1P21579 422 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 ZNF131P52739 623 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 GRIN1Q05586 938 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 PTPAQ15257 358 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 UPP1Q16831 310 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
VPS8-221ENST00000471655 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 UBALD2Q8IYN6 164 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 CEP120Q8N960 986 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
VPS8-221ENST00000471655 ACSF2Q96CM8 615 aaPredicted RBP16.4■□□□□ 0.22
VPS8-221ENST00000471655 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
VPS8-221ENST00000471655 ACAP3Q96P50 834 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 SORCS3Q9UPU3 1222 aa16.4■□□□□ 0.22
VPS8-221ENST00000471655 MORC2Q9Y6X9 1032 aaPredicted RBP16.4■□□□□ 0.22
VPS8-221ENST00000471655 MTCL1Q9Y4B5 1905 aaKnown RBP16.39■□□□□ 0.21
VPS8-221ENST00000471655 MYH11P35749 1972 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 B3GAT3O94766 335 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 PLCG1P19174 1290 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 FGFR3P22607 806 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
VPS8-221ENST00000471655 CLCNKBP51801 687 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 MCL1Q07820 350 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 RESTQ13127 1097 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 GLRA4Q5JXX5 417 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 PRSS55Q6UWB4 352 aaPredicted RBP16.39■□□□□ 0.21
VPS8-221ENST00000471655 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 FEZF2Q8TBJ5 459 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 HASPINQ8TF76 798 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 RAD54LQ92698 747 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 FAM122AQ96E09 287 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 ASIC4Q96FT7 647 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 SNX27Q96L92 541 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 CLSTN3Q9BQT9 956 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 REEP2Q9BRK0 252 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 WDR6Q9NNW5 1121 aaKnown RBP16.39■□□□□ 0.21
VPS8-221ENST00000471655 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 CLIC4Q9Y696 253 aa16.39■□□□□ 0.21
VPS8-221ENST00000471655 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
VPS8-221ENST00000471655 CLDN3O15551 220 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 ABCD1P33897 745 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 DDIT3P35638 169 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 OSTNP61366 133 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 MTMR3Q13615 1198 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
VPS8-221ENST00000471655 KARSQ15046 597 aaKnown RBP16.38■□□□□ 0.21
VPS8-221ENST00000471655 PSMD5Q16401 504 aa16.38■□□□□ 0.21
VPS8-221ENST00000471655 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms