RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 MICAL3Q7RTP6 2002 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 MEFVO15553 781 aaPredicted RBP22.58■■□□□ 1.21
BRAF-202ENST00000469930 RECQL4O94761 1208 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 KCNE1P15382 129 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 SYN1P17600 705 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 GTF2H1P32780 548 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 VAMP7P51809 220 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 AP3M2P53677 418 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 SEZ6Q53EL9 994 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 TMEM240Q5SV17 173 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 NPAS4Q8IUM7 802 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 RNF214Q8ND24 703 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 ANKRD20A12PQ8NF67 263 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 HERVK_113Q902F9 699 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 SNX27Q96L92 541 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 RNF39Q9H2S5 420 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 HES2Q9Y543 173 aa22.58■■□□□ 1.21
BRAF-202ENST00000469930 TTC3P53804 2025 aa22.58■■□□□ 1.2
BRAF-202ENST00000469930 PMM2O15305 246 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 HOXA2O43364 376 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 STX10O60499 249 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 CDK11BP21127 795 aaKnown RBP22.57■■□□□ 1.2
BRAF-202ENST00000469930 MAN2A1Q16706 1144 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 APTXQ7Z2E3 356 aaKnown RBP22.57■■□□□ 1.2
BRAF-202ENST00000469930 PLEKHO2Q8TD55 490 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 C2CD2Q9Y426 696 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 PCDHB7Q9Y5E2 793 aa22.57■■□□□ 1.2
BRAF-202ENST00000469930 RALGAPA2Q2PPJ7 1873 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 FSD2A1L4K1 749 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 LACTBL1A8MY62 500 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 CXCL8P10145 99 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 OSTNP61366 133 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 ZBTB6Q15916 424 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 C1orf220Q5T0J3 134 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 ZNF365Q70YC5 407 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 WDR49Q8IV35 697 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 TOP1MTQ969P6 601 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 SLC35C1Q96A29 364 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 CGRRF1Q99675 332 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 TUBGCP2Q9BSJ2 902 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 RSAD1Q9HA92 442 aa22.56■■□□□ 1.2
BRAF-202ENST00000469930 AMHP03971 560 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 ACRP10323 421 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 ATP1A3P13637 1013 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 EPHB4P54760 987 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 WDR5P61964 334 aaKnown RBP22.55■■□□□ 1.2
BRAF-202ENST00000469930 KRT31Q15323 416 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 RASIP1Q5U651 963 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 GSTCDQ8NEC7 633 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 FNBP1Q96RU3 617 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 PDE11AQ9HCR9 933 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 RNF19AQ9NV58 838 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 PARP2Q9UGN5 583 aa22.55■■□□□ 1.2
BRAF-202ENST00000469930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.55■■□□□ 1.2
BRAF-202ENST00000469930 CITO14578 2027 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 P4HA2O15460 535 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 OFD1O75665 1012 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 CYP3A5P20815 502 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 AKAP5P24588 427 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 MTIF2P46199 727 aaKnown RBP22.54■■□□□ 1.2
BRAF-202ENST00000469930 WNT7BP56706 349 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 SARM1Q6SZW1 724 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.54■■□□□ 1.22e-7■□□□□ 9.5
BRAF-202ENST00000469930 PHOSPHO2Q8TCD6 241 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
BRAF-202ENST00000469930 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.54■■□□□ 1.2
BRAF-202ENST00000469930 INTS13Q9NVM9 706 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 KANSL3Q9P2N6 904 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 ANK1P16157 1881 aa22.54■■□□□ 1.2
BRAF-202ENST00000469930 SMIM28A0A1B0GU29 152 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 ARL5CA6NH57 179 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 LRRIQ3A6PVS8 624 aaPredicted RBP22.53■■□□□ 1.2
BRAF-202ENST00000469930 MEIS3P2A8K0S8 358 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 TPM2P07951 284 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 VWA3BQ502W6 1294 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 MIIPQ5JXC2 388 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 GLB1LQ6UWU2 654 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 C15orf39Q6ZRI6 1047 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 LPPQ93052 612 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 APOL6Q9BWW8 343 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 MTIF3Q9H2K0 278 aaKnown RBP22.53■■□□□ 1.2
BRAF-202ENST00000469930 LRFN2Q9ULH4 789 aa22.53■■□□□ 1.2
BRAF-202ENST00000469930 GTPBP10A4D1E9 387 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 PTGESO14684 152 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 XPOTO43592 962 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 N4BP1O75113 896 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 AFPP02771 609 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 C4BPAP04003 597 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 COPB1P53618 953 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 DLG4P78352 724 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 FANCCQ00597 558 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 KCNH2Q12809 1159 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 DUOXA2Q1HG44 320 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 CLLU1OSQ5K130 101 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 CCDC127Q96BQ5 260 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 PPP1R10Q96QC0 940 aaKnown RBP22.52■■□□□ 1.2
BRAF-202ENST00000469930 GAD1Q99259 594 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 GDF15Q99988 308 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 TMEM117Q9H0C3 514 aa22.52■■□□□ 1.2
BRAF-202ENST00000469930 NDST4Q9H3R1 872 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms