RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LINC01465Q8N7H1 131 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 PIBF1Q8WXW3 757 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
VPS26A-204ENST00000467852 AVENQ9NQS1 362 aaPredicted RBP13.15□□□□□ -0.3
VPS26A-204ENST00000467852 ZSWIM5Q9P217 1185 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 DKK4Q9UBT3 224 aa13.15□□□□□ -0.3
VPS26A-204ENST00000467852 TEX15Q9BXT5 2789 aa13.15□□□□□ -0.31
VPS26A-204ENST00000467852 A0A087WV48 116 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
VPS26A-204ENST00000467852 ZNF213O14771 459 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 CYTH3O43739 400 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 PTPN2P17706 415 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 MAPK8P45983 427 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 ITGB3BPQ13352 177 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-204ENST00000467852 CCINQ13939 588 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 PON2Q15165 354 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 CATSPER4Q7RTX7 472 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
VPS26A-204ENST00000467852 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-204ENST00000467852 YAF2Q8IY57 180 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 CLSTN3Q9BQT9 956 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 UBN1Q9NPG3 1134 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
VPS26A-204ENST00000467852 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 F8W810 466 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 SPECC1L-ADORA2AF8WAN1 911 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 DCLK1O15075 740 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 CCNE2O96020 404 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 SOX9P48436 509 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 CFHR1Q03591 330 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 GRM4Q14833 912 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 C11orf74Q86VG3 221 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 ADAMTS14Q8WXS8 1223 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 FAM167AQ96KS9 214 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 PSTPIP2Q9H939 334 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
VPS26A-204ENST00000467852 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-204ENST00000467852 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 MAFBQ9Y5Q3 323 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-204ENST00000467852 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
VPS26A-204ENST00000467852 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 ARNTLO00327 626 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 ZNF197O14709 1029 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 TADA2AO75478 443 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 CTHP32929 405 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 FAM193AP78312 1265 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 DSC1Q08554 894 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 PSMD5Q16401 504 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 TXNDC11Q6PKC3 985 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 GON4LQ3T8J9 2241 aa13.12□□□□□ -0.31
VPS26A-204ENST00000467852 PTPRBP23467 1997 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
VPS26A-204ENST00000467852 A0A087WZ62 844 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 CHADO15335 359 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 MICAL2O94851 1124 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 VIPR2P41587 438 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-204ENST00000467852 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 CNNM3Q8NE01 707 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 PIP4K2CQ8TBX8 421 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 PIGKQ92643 395 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 E2F7Q96AV8 911 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 FDXACB1Q9BRP7 624 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-204ENST00000467852 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
VPS26A-204ENST00000467852 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 ITGA4P13612 1032 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 TRIP6Q15654 476 aaKnown RBP13.1□□□□□ -0.31
VPS26A-204ENST00000467852 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
VPS26A-204ENST00000467852 KRT23Q9C075 422 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
VPS26A-204ENST00000467852 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
VPS26A-204ENST00000467852 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPS26A-204ENST00000467852 SPTAN1Q13813 2472 aaKnown RBP13.1□□□□□ -0.31
VPS26A-204ENST00000467852 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 HEPACAM2A8MVW5 462 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
VPS26A-204ENST00000467852 WISP1O95388 367 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 LRG1P02750 347 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms