RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 TMEM206Q9H813 350 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 UBE2TQ9NPD8 197 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-205ENST00000467213 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-205ENST00000467213 EXOC3O60645 756 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 FOXN2P32314 431 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 CHKAP35790 457 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 ENPEPQ07075 957 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 TRAF1Q13077 416 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 AP1ARQ63HQ0 302 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 CCDC25Q86WR0 208 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 CCDC89Q8N998 374 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 ANKRD42Q8N9B4 389 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 FAM13CQ8NE31 585 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 SLC7A6OSQ96CW6 309 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-205ENST00000467213 PCDHB18PQ96TA0 734 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 DCLK3Q9C098 648 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 CYLDQ9NQC7 956 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
CHD1L-205ENST00000467213 ZNFX1Q9P2E3 1918 aaKnown RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 LRRD1A4D1F6 860 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SLITRK3O94933 977 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 ATF2P15336 505 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 ITGA8P53708 1063 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 MFSD14BQ5SR56 506 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 TMEM63BQ5T3F8 832 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 IRGCQ6NXR0 463 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SHC3Q92529 594 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 NACC1Q96RE7 527 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 ASIC3Q9UHC3 531 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 ANAPC5Q9UJX4 755 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 CHKBQ9Y259 395 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 EDF1O60869 148 aaKnown RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SNUPNO95149 360 aaKnown RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 GH1P01241 217 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SLC16A2P36021 539 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 WDR4P57081 412 aaKnown RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 TRABD2AQ86V40 505 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 VSIG1Q86XK7 387 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 RBBP8NLQ8NC74 664 aaPredicted RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 P2RX7Q99572 595 aaKnown RBP16.59■□□□□ 0.25
CHD1L-205ENST00000467213 GGT7Q9UJ14 662 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
CHD1L-205ENST00000467213 EML1O00423 815 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 TRIM49P0CI25 452 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 TRIM49CP0CI26 452 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 KCNJ1P48048 391 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.25
CHD1L-205ENST00000467213 CCNG2Q16589 344 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 KYNUQ16719 465 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 KCTD1Q719H9 257 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 CFAP57Q96MR6 1250 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.25
CHD1L-205ENST00000467213 C2CD2LO14523 706 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 ZBED4O75132 1171 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 PSMD10O75832 226 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 GSTA2P09210 222 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 PTPN4P29074 926 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 VAMP7P51809 220 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 FMO1Q01740 532 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 RASA3Q14644 834 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 SLC30A9Q6PML9 568 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 CYP4X1Q8N118 509 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 ZCCHC9Q8N567 271 aaKnown RBP16.58■□□□□ 0.24
CHD1L-205ENST00000467213 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 SLC5A5Q92911 643 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 PHACTR1Q9C0D0 580 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 ST6GALNAC4Q9H4F1 302 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 NKX1-2Q9UD57 310 aaPredicted RBP16.58■□□□□ 0.24
CHD1L-205ENST00000467213 PHTF1Q9UMS5 762 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 TRIM33Q9UPN9 1127 aa16.58■□□□□ 0.24
CHD1L-205ENST00000467213 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 T-ENOLP0DO92 83 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 MYBL1P10243 752 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 CDR2Q01850 454 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 KLC1Q07866 573 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 ZC2HC1CQ53FD0 456 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-205ENST00000467213 NOP9Q86U38 636 aaKnown RBP16.57■□□□□ 0.24
CHD1L-205ENST00000467213 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 C10orf82Q8WW14 230 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 TRIM11Q96F44 468 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 SIPA1L1O43166 1804 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-205ENST00000467213 RAD23BP54727 409 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 MFAP3P55082 362 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 INHBEP58166 350 aa16.57■□□□□ 0.24
CHD1L-205ENST00000467213 GPSM2P81274 684 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms