RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 GH1P01241 217 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 CD4P01730 458 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 ITGA4P13612 1032 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 LIFRP42702 1097 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 PURAQ00577 322 aaKnown RBP7.35□□□□□ -1.23
TPM3-214ENST00000466010 BEX3Q00994 111 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 PTH1RQ03431 593 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 TROAPQ12815 778 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 MMRN1Q13201 1228 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 KRT32Q14532 448 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 XRRA1Q6P2D8 792 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 STOX1Q6ZVD7 989 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 GSTCDQ8NEC7 633 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 OR2W6PQ8NHA6 318 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 SLC7A14Q8TBB6 771 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 KCTD13Q8WZ19 329 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 RRP36Q96EU6 259 aaKnown RBP7.35□□□□□ -1.23
TPM3-214ENST00000466010 KATNAL1Q9BW62 490 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 SPZ1Q9BXG8 430 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 IL25Q9H293 177 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 ALDH8A1Q9H2A2 487 aaPredicted RBP7.35□□□□□ -1.23
TPM3-214ENST00000466010 HIPK3Q9H422 1215 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 IFT22Q9H7X7 185 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 VAT1LQ9HCJ6 419 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 PDGFCQ9NRA1 345 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 APOBEC2Q9Y235 224 aaKnown RBP7.35□□□□□ -1.23
TPM3-214ENST00000466010 AKT3Q9Y243 479 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 STXBP5LQ9Y2K9 1186 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 TNPO3Q9Y5L0 923 aaKnown RBP7.35□□□□□ -1.23
TPM3-214ENST00000466010 LTBP2Q14767 1821 aa7.35□□□□□ -1.23
TPM3-214ENST00000466010 COL6A3P12111 3177 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 GCOM1H8Y6P7 765 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 CREB3O43889 395 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 JMJD7P0C870 316 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 POLR2MP0CAP2 368 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 CASTP20810 708 aaKnown RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 RFC2P35250 354 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 RCAN1P53805 252 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 RNF4P78317 190 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 TMPRSS15P98073 1019 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 SHHQ15465 462 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 DGKDQ16760 1214 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 SYNE3Q6ZMZ3 975 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 NFXL1Q6ZNB6 911 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 MAMDC2Q7Z304 686 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 TRIM59Q8IWR1 403 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 MB21D2Q8IYB1 491 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 GOLGA6L1Q8N7Z2 621 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 BAHD1Q8TBE0 780 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 IGDCC4Q8TDY8 1250 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 PTPRN2Q92932 1015 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 CUL5Q93034 780 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 RCC1LQ96I51 464 aaKnown RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 MAGEB10Q96LZ2 347 aaPredicted RBP7.34□□□□□ -1.23
TPM3-214ENST00000466010 CDH19Q9H159 772 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 ATXN3LQ9H3M9 355 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 IL23AQ9NPF7 189 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 PXMP2Q9NR77 195 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 MTMR10Q9NXD2 777 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 LRRC37A2A6NM11 1700 aa7.34□□□□□ -1.23
TPM3-214ENST00000466010 MCM3APO60318 1980 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 TMPRSS2O15393 492 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 B4GALT4O60513 344 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 PPFIA4O75335 1185 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 MYL3P08590 195 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 ACTN1P12814 892 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 NAT1P18440 290 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 ITGB8P26012 769 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 CCND2P30279 289 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 GRIA2P42262 883 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
TPM3-214ENST00000466010 BFSP2Q13515 415 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 NECTIN1Q15223 517 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 PCBP1Q15365 356 aaKnown RBP eCLIP7.33□□□□□ -1.24
TPM3-214ENST00000466010 CCDC62Q6P9F0 684 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 SEPT14Q6ZU15 432 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 VSIG10LQ86VR7 867 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 SESTD1Q86VW0 696 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 SGMS1Q86VZ5 419 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 GIMAP8Q8ND71 665 aaPredicted RBP7.33□□□□□ -1.24
TPM3-214ENST00000466010 PPTC7Q8NI37 304 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 CAGE1Q8TC20 777 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
TPM3-214ENST00000466010 CDHR1Q96JP9 859 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 CCDC140Q96MF4 163 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 TAAR1Q96RJ0 339 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 DPH2Q9BQC3 489 aaPredicted RBP7.33□□□□□ -1.24
TPM3-214ENST00000466010 PDCD2LQ9BRP1 358 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 LSG1Q9H089 658 aaKnown RBP7.33□□□□□ -1.24
TPM3-214ENST00000466010 CPVLQ9H3G5 476 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 LY9Q9HBG7 655 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 AAASQ9NRG9 546 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 EMC9Q9Y3B6 208 aa7.33□□□□□ -1.24
TPM3-214ENST00000466010 GRIN2DO15399 1336 aa7.32□□□□□ -1.24
TPM3-214ENST00000466010 CCDC196A0A1B0GTZ2 297 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms