RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 AK2P54819 239 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 FKBP1AP62942 108 aaKnown RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 ZNF124Q15973 351 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 TMEM177Q53S58 311 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 PIK3R6Q5UE93 754 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 STRIP1Q5VSL9 837 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 LRRTM3Q86VH5 581 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 CERS3Q8IU89 383 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 PHOSPHO1Q8TCT1 267 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 SDR42E1Q8WUS8 393 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 TMX3Q96JJ7 454 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 SLC38A3Q99624 504 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 SYT3Q9BQG1 590 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 MXD3Q9BW11 206 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 ALDH8A1Q9H2A2 487 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 ZNF277Q9NRM2 450 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 COL4A5P29400 1685 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 TIAM2Q8IVF5 1701 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 GPR75-ASB3A0A0A6YYF3 556 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 MAN2B1O00754 1011 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 NCAM1P13591 858 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 GLDCP23378 1020 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 BTDP43251 543 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 EXOSC10Q01780 885 aaKnown RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 TRDNQ13061 729 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 ANKRD1Q15327 319 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 TM4SF20Q53R12 229 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 DACT2Q5SW24 774 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 CDCA2Q69YH5 1023 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 FSTL4Q6MZW2 842 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 CYP4F22Q6NT55 531 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 KCTD1Q719H9 257 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 DDX53Q86TM3 631 aaKnown RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 MIB1Q86YT6 1006 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 FAM126BQ8IXS8 530 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 NCOA7Q8NI08 942 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 ZSCAN31Q96LW9 406 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 YIPF4Q9BSR8 244 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 TARS2Q9BW92 718 aaKnown RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 SLKQ9H2G2 1235 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 ATP8A2Q9NTI2 1148 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 INTS7Q9NVH2 962 aaKnown RBP8.54□□□□□ -1.04
UBE4B-204ENST00000462658 LIMCH1Q9UPQ0 1083 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 MYH13Q9UKX3 1938 aa8.54□□□□□ -1.04
UBE4B-204ENST00000462658 YDJCA8MPS7 323 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 B4E1Z4 1266 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 NFIBO00712 420 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 KPNA6O60684 536 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 PFKLP17858 780 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 IARSP41252 1262 aaKnown RBP8.53□□□□□ -1.04
UBE4B-204ENST00000462658 LIMS1P48059 325 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 LACTBP83111 547 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-204ENST00000462658 PPARAQ07869 468 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 CUL4AQ13619 759 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 TOB2Q14106 344 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-204ENST00000462658 SSPNQ14714 243 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 TARBP2Q15633 366 aaKnown RBP8.53□□□□□ -1.04
UBE4B-204ENST00000462658 CFAP100Q494V2 611 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 CTR9Q6PD62 1173 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 CD300LDQ6UXZ3 194 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 Q6ZUG5 572 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 RALYLQ86SE5 291 aaKnown RBP8.53□□□□□ -1.04
UBE4B-204ENST00000462658 TBC1D10CQ8IV04 446 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 TCEANC2Q96MN5 208 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 MRIQ9BWK5 157 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 ANAPC4Q9UJX5 808 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 SRPK3Q9UPE1 567 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 GAKO14976 1311 aa8.53□□□□□ -1.04
UBE4B-204ENST00000462658 TCAF2A6NFQ2 919 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 CLSTN1O94985 981 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 C8BP07358 591 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MYCLP1P12525 358 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 IGFBP6P24592 240 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MCM5P33992 734 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 SBK1Q52WX2 424 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MFSD6Q6ZSS7 791 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 UBE2R2Q712K3 238 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MB21D2Q8IYB1 491 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 TEX11Q8IYF3 940 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 TMEFF1Q8IYR6 380 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 STAG1Q8WVM7 1258 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 TEKT1Q969V4 418 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 PPP1R16BQ96T49 567 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 RNF38Q9H0F5 515 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 TAOK3Q9H2K8 898 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 RNF41Q9H4P4 317 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms