RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 EPOPA6NHQ4 379 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 RFXAPO00287 272 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 EXTL3O43909 919 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 STX10O60499 249 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 SFPQP23246 707 aaKnown RBP eCLIP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 ADSSP30520 456 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 TSHZ1Q6ZSZ6 1077 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 PPFIBP1Q86W92 1011 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 ATXN2LQ8WWM7 1075 aaKnown RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 SAAL1Q96ER3 474 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 ACO2Q99798 780 aaKnown RBP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 ADAMTS10Q9H324 1103 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 CERS4Q9HA82 394 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 LMCD1Q9NZU5 365 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 TNFSF13BQ9Y275 285 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 MTCH2Q9Y6C9 303 aa16.5■□□□□ 0.23
TMEM39A-203ENST00000461654 CNTNAP2Q9UHC6 1331 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 A0A1W2PQC6 194 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 TEX33O43247 280 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 LPXNO60711 386 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 GHRP10912 638 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 GSDMDP57764 484 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 MIIPQ5JXC2 388 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 CATSPER4Q7RTX7 472 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 ADPGKQ9BRR6 497 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 CELF4Q9BZC1 486 aaKnown RBP16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 MINDY3Q9H8M7 445 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
TMEM39A-203ENST00000461654 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 A0A0B4J269 797 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 ENPP3O14638 875 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 GPR32O75388 356 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 DARSP14868 501 aaKnown RBP16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 VAMP7P51809 220 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 ENPEPQ07075 957 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 KCNH2Q12809 1159 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 BFSP1Q12934 665 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 TRIM14Q14142 442 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 KYAT1Q16773 422 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 FAM117BQ6P1L5 589 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 ZBTB33Q86T24 672 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 FBXL18Q96ME1 805 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 OSMRQ99650 979 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 NUP58Q9BVL2 599 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 AGO3Q9H9G7 860 aaKnown RBP16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 USP20Q9Y2K6 914 aa16.48■□□□□ 0.23
TMEM39A-203ENST00000461654 COL4A6Q14031 1691 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 OGTO15294 1046 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 N4BP1O75113 896 aaKnown RBP16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 MCL1Q07820 350 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 CETN1Q12798 172 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 SPRED2Q7Z698 418 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 BORCS6Q96GS4 357 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 SAMD11Q96NU1 681 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 FTHL17Q9BXU8 183 aa16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
TMEM39A-203ENST00000461654 EYSQ5T1H1 3165 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 B4GALT5O43286 388 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 NRDCO43847 1150 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 TSPAN1O60635 241 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 EDN1P05305 212 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 MCF2P10911 925 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 AXLP30530 894 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 PBX1P40424 430 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 SYCP1Q15431 976 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 SURF1Q15526 300 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 AMHR2Q16671 573 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 CRIPAKQ8N1N5 446 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 CCDC150Q8NCX0 1101 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms