RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 TAS1R3Q7RTX0 852 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 HOOK3Q86VS8 718 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 SLC13A5Q86YT5 568 aaPredicted RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 PRELID2Q8N945 189 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 CCDC127Q96BQ5 260 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 KLRG1Q96E93 195 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 SAAL1Q96ER3 474 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 WRNIP1Q96S55 665 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 NUP85Q9BW27 656 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 PORCNQ9H237 461 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 LRRC19Q9H756 370 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 A1CFQ9NQ94 594 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 C1orf112Q9NSG2 853 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 ADGRA3Q8IWK6 1321 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 MMEP08473 750 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 LSP1P33241 339 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 ARL2P36404 184 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 USP8P40818 1118 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 RFC5P40937 340 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 AP3M2P53677 418 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 DHX9Q08211 1270 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 GRM1Q13255 1194 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 STXBP2Q15833 593 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 ZNF653Q96CK0 615 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 CELF4Q9BZC1 486 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 POLR3FQ9H1D9 316 aaPredicted RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 PABPC3Q9H361 631 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 ERVK-5Q9HDB9 667 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 MTRF1LQ9UGC7 380 aaKnown RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 FBXO40Q9UH90 709 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 RSPH14Q9UHP6 348 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 LCMT1Q9UIC8 334 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 NR2E1Q9Y466 385 aa10.58□□□□□ -0.72
DHFR2-203ENST00000461173 COL11A1P12107 1806 aaPredicted RBP10.58□□□□□ -0.72
DHFR2-203ENST00000461173 MYO1FO00160 1098 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 FSCN2O14926 492 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 C4BPAP04003 597 aaKnown RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 TBXAS1P24557 533 aaPredicted RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 MAGEA9P43362 315 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 LIG4P49917 911 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 HMGCS2P54868 508 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 CENPCQ03188 943 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 STRN3Q13033 797 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 DGKZQ13574 1117 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 MESDQ14696 234 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SLMAPQ14BN4 828 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 EMC2Q15006 297 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 WDR44Q5JSH3 913 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 FOXR1Q6PIV2 292 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 YTHDF3Q7Z739 585 aaKnown RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SH2D3CQ8N5H7 860 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 KRT35Q92764 455 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 MAGOHBQ96A72 148 aaKnown RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 TLCD1Q96CP7 247 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 KIFC3Q9BVG8 833 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 FEZ2Q9UHY8 353 aaPredicted RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 MYH9P35579 1960 aaKnown RBP10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SIP14410 1827 aa10.57□□□□□ -0.72
DHFR2-203ENST00000461173 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 VGLL3A8MV65 326 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 SPOPO43791 374 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 OATP04181 439 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 CYP1A1P04798 512 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 TGFB3P10600 412 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 EDNRBP24530 442 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 COILP38432 576 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 CDR1P51861 262 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 BYSLQ13895 437 aaKnown RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 SIX1Q15475 284 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 PTPROQ16827 1216 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 TBC1D10BQ4KMP7 808 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 KCTD16Q68DU8 428 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 ZDHHC24Q6UX98 284 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 EXOC8Q8IYI6 725 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 UBLCP1Q8WVY7 318 aaPredicted RBP10.56□□□□□ -0.72
DHFR2-203ENST00000461173 CENPTQ96BT3 561 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 BICD1Q96G01 975 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 PGM2Q96G03 612 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 FNBP1Q96RU3 617 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 SH2D3AQ9BRG2 576 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 MTFR1LQ9H019 292 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
DHFR2-203ENST00000461173 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms