RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SFNP31947 248 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 C12orf60Q5U649 245 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SNX5Q9Y5X3 404 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PI4K2BG5E9Z4 385 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PMLP29590 882 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 CRYMQ14894 314 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 EPHA7Q15375 998 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 APOBEC3FQ8IUX4 373 aaKnown RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SLC4A1P02730 911 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SDC4P31431 198 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 FMO5P49326 533 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 CARD9Q9H257 536 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ADA2Q9NZK5 511 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ABCB11O95342 1321 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 KCNA3P22001 575 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CDK17Q00537 523 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 MAPRE2Q15555 327 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 TMEM154Q6P9G4 183 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 DSTYKQ6XUX3 929 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 THNSL1Q8IYQ7 743 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 BFARQ9NZS9 450 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 H3BQF6 201 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CYP26A1O43174 497 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 NFKBIAP25963 317 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 TYK2P29597 1187 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 EFTUD2Q15029 972 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■■■□□ 18.6
SEC16A-207ENST00000453963 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 ZBTB18Q99592 522 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 LXNQ9BS40 222 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 MTO1Q9Y2Z2 717 aaKnown RBP12.72□□□□□ -0.37
SEC16A-207ENST00000453963 NFX1Q12986 1120 aaKnown RBP12.72□□□□□ -0.37
SEC16A-207ENST00000453963 ITIH4Q14624 930 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CYFIP1Q7L576 1253 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 ZNF34Q8IZ26 560 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 C9orf72Q96LT7 481 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 ARPP19P56211 112 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 MAPK6Q16659 721 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 NPHS2Q9NP85 383 aa12.72□□□□□ -0.37
SEC16A-207ENST00000453963 FNDC3AQ9Y2H6 1198 aaKnown RBP12.72□□□□□ -0.37
SEC16A-207ENST00000453963 FDX1P10109 184 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 AP3M2P53677 418 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 KDSRQ06136 332 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 AP1B1Q10567 949 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 SLC29A2Q14542 456 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 DAB2IPQ5VWQ8 1189 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 GPD1LQ8N335 351 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 TBC1D16Q8TBP0 767 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 PTPRUQ92729 1446 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
SEC16A-207ENST00000453963 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.37
SEC16A-207ENST00000453963 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 TOPORSQ9NS56 1045 aaPredicted RBP12.71□□□□□ -0.37
SEC16A-207ENST00000453963 RAB21Q9UL25 225 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 SLC8A2Q9UPR5 921 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 ARHGDIAP52565 204 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 P3H1Q32P28 736 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 RFX8Q6ZV50 586 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
SEC16A-207ENST00000453963 CASKIN2Q8WXE0 1202 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 NEU2Q9Y3R4 380 aa12.71□□□□□ -0.37
SEC16A-207ENST00000453963 SMAPO00193 183 aa12.71□□□□□ -0.38
SEC16A-207ENST00000453963 TBX3O15119 743 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms