RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 ANAPC7Q9UJX3 599 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 COBLO75128 1261 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 CALB1P05937 261 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 IDI1Q13907 227 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 PDZK1Q5T2W1 519 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-211ENST00000449833 VPS11Q9H270 941 aa12.23□□□□□ -0.45
SHANK2-211ENST00000449833 PCP4L1A6NKN8 68 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 AKAP10O43572 662 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 BRAFP15056 766 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 KCNJ6P48051 423 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 MXI1P50539 228 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 C11orf88Q6PI97 169 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 KDM5DQ9BY66 1539 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 FANCAO15360 1455 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 SEMA3DO95025 777 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 RAB15P59190 212 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 GUCA1CO95843 209 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CDH3P22223 829 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PTPN12Q05209 780 aaKnown RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ZNF554Q86TJ5 538 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CHMP1AQ9HD42 196 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 TNKSO95271 1327 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 KLHL41O60662 606 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ALAS1P13196 640 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CHRNA3P32297 505 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 GPS1Q13098 491 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 GATAD2AQ86YP4 633 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 HEXIM2Q96MH2 286 aaKnown RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PABPC4Q13310 644 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 MYBPC2Q14324 1141 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 COG2Q14746 738 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 AGBL2Q5U5Z8 902 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 LVRNQ6Q4G3 990 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CCNYL1Q8N7R7 359 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 MLXIPLQ9NP71 852 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 SKAP2O75563 359 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PAX7P23759 505 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PEX5LQ8IYB4 626 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
SHANK2-211ENST00000449833 S100ZQ8WXG8 99 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 APPL1Q9UKG1 709 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 PCDHA1Q9Y5I3 950 aa12.22□□□□□ -0.45
SHANK2-211ENST00000449833 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 AGTP01019 485 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 ALDH18A1P54886 795 aaKnown RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 ITGA1P56199 1179 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 POU5F1BQ06416 359 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 PKP1Q13835 747 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 OR8H2Q8N162 312 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 C7orf31Q8N865 590 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 KLHL18O94889 574 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 CDO1Q16878 200 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 LPCAT2Q7L5N7 544 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 TRIM74Q86UV6 250 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 TRIM73Q86UV7 250 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 TRIM54Q9BYV2 358 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 NDUFB9Q9Y6M9 179 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 CTSWP56202 376 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 ERICH1Q86X53 443 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 DMAP1Q9NPF5 467 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-211ENST00000449833 PIK3R1P27986 724 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 APOL6Q9BWW8 343 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 ING3Q9NXR8 418 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 DSEQ9UL01 958 aa12.21□□□□□ -0.45
SHANK2-211ENST00000449833 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 POTECB2RU33 542 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 TRIP10Q15642 601 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 C15orf59Q2T9L4 293 aaPredicted RBP12.21□□□□□ -0.46
SHANK2-211ENST00000449833 GPATCH4Q5T3I0 446 aaKnown RBP12.21□□□□□ -0.46
SHANK2-211ENST00000449833 RBM20Q5T481 1227 aaKnown RBP12.21□□□□□ -0.46
SHANK2-211ENST00000449833 PROM2Q8N271 834 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 CACNA2D2Q9NY47 1150 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 USP17L12C9JPN9 530 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 USP17L21D6R901 530 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 H0YIN7 160 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 COX10Q12887 443 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 MFSD14BQ5SR56 506 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.46
SHANK2-211ENST00000449833 IYDQ6PHW0 289 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.46
SHANK2-211ENST00000449833 ACAD9Q9H845 621 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms