RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANLNQ9NQW6 1124 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 GOLGA6AQ9NYA3 693 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 FOXD2O60548 495 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 FPR1P21462 350 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 COMTP21964 271 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 GTF2H3Q13889 308 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 R3HDM1Q15032 1099 aaKnown RBP5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 VPS72Q15906 364 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 LONRF3Q496Y0 759 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 METTL24Q5JXM2 366 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 HTR3DQ70Z44 454 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 TICAM2Q86XR7 235 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 D2HGDHQ8N465 521 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 MDGA1Q8NFP4 955 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 FBXO18Q8NFZ0 1043 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 AJAP1Q9UKB5 411 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P48-201ENST00000446155 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 CXorf49A8MYA2 514 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 B5MCH6 92 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 K7ESM1 405 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 PJA2O43164 708 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 PPFIA4O75335 1185 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 GPR32O75388 356 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 CT47B1P0C2W7 299 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 PTPN7P35236 360 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 RABGGTBP53611 331 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 PER3P56645 1201 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 EFEMP1Q12805 493 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 RALBP1Q15311 655 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 GFOD2Q3B7J2 385 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 ANKS6Q68DC2 871 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 OTUD7BQ6GQQ9 843 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 ZNF808Q8N4W9 903 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 OR52N2Q8NGI0 321 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 EDAQ92838 391 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 RAB24Q969Q5 203 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 ARL8AQ96BM9 186 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 RUNDC1Q96C34 613 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 MVB12AQ96EY5 273 aa5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 UHRF1Q96T88 793 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 CPEB1Q9BZB8 566 aaKnown RBP5.63□□□□□ -1.51
HMGB1P48-201ENST00000446155 IL2RBP14784 551 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SYN1P17600 705 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 DDCP20711 480 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 PAX3P23760 479 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ALDH1A3P47895 512 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SELENOPP49908 381 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 PLP2Q04941 152 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 DHX8Q14562 1220 aaKnown RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ZNF267Q14586 743 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ELAVL1Q15717 326 aaKnown RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 IFIT1BQ5T764 474 aaKnown RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 AFMIDQ63HM1 303 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 PPP4R3AQ6IN85 833 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SEM1Q6ZVN7 128 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 DCBLD1Q8N8Z6 715 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SLC35B2Q8TB61 432 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SLC35G2Q8TBE7 412 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 CCHCR1Q8TD31 782 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 DIS3LQ8TF46 1054 aaKnown RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ST8SIA2Q92186 375 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 MIEF2Q96C03 454 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 TAAR9Q96RI9 348 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SENP6Q9GZR1 1112 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 NMRK2Q9NPI5 230 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 TDP1Q9NUW8 608 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 SLC23A1Q9UHI7 598 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ST6GALNAC2Q9UJ37 374 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 ACTL7AQ9Y615 435 aa5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 MYBBP1AQ9BQG0 1328 aaKnown RBP5.62□□□□□ -1.51
HMGB1P48-201ENST00000446155 IFRD1O00458 451 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 DTNBO60941 627 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 OFD1O75665 1012 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 U2AF1L5P0DN76 240 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 HSPA6P17066 643 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 CTXN1P60606 82 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 U2AF1Q01081 240 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 TLE1Q04724 770 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 RAB39AQ14964 217 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 CDSNQ15517 529 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 BMT2Q1RMZ1 405 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 DCAF17Q5H9S7 520 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 DRICH1Q6PGQ1 229 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 PNPLA7Q6ZV29 1317 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 TTC7BQ86TV6 843 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 FAM83AQ86UY5 434 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 PLXDC1Q8IUK5 500 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 ELOA2Q8IYF1 753 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 ANKRD35Q8N283 1001 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 STON2Q8WXE9 905 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 LOXL4Q96JB6 756 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 C1QTNF3Q9BXJ4 246 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 TMEM140Q9NV12 185 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms