RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 TOM1L1O75674 476 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 URODP06132 367 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 IGFBP6P24592 240 aaPredicted RBP16.16■□□□□ 0.18
USE1-202ENST00000445667 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
USE1-202ENST00000445667 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
USE1-202ENST00000445667 GLUD2P49448 558 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 YARSP54577 528 aaKnown RBP16.16■□□□□ 0.18
USE1-202ENST00000445667 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 ALKAL1Q6UXT8 129 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 PDILTQ8N807 584 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 BICD1Q96G01 975 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 ACAP3Q96P50 834 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 PPP1R10Q96QC0 940 aaKnown RBP16.16■□□□□ 0.18
USE1-202ENST00000445667 HAPLN2Q9GZV7 340 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 EPHX3Q9H6B9 360 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 MYH11P35749 1972 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 C5orf42Q9H799 3197 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 CLDN3O15551 220 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 PPP6R2O75170 966 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 KIF4AO95239 1232 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 BRD1O95696 1058 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
USE1-202ENST00000445667 HOXB8P17481 243 aaPredicted RBP16.15■□□□□ 0.18
USE1-202ENST00000445667 DSG1Q02413 1049 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 USP41Q3LFD5 358 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 CCDC73Q6ZRK6 1079 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 SUSD6Q92537 303 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 DDX12PQ92771 950 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
USE1-202ENST00000445667 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 TBX20Q9UMR3 447 aa16.15■□□□□ 0.18
USE1-202ENST00000445667 TEX28O15482 410 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 MEFVO15553 781 aaPredicted RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 YEATS4O95619 227 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 WEE2P0C1S8 567 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 STAT6P42226 847 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 LIG4P49917 911 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 CLCN4P51793 760 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 CLCNKBP51801 687 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 MCL1Q07820 350 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 NOLC1Q14978 699 aaKnown RBP eCLIP16.14■□□□□ 0.17
USE1-202ENST00000445667 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 ZC2HC1CQ53FD0 456 aaPredicted RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 XKR4Q5GH76 650 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 RARS2Q5T160 578 aaKnown RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 PPFIBP1Q86W92 1011 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 SFR1Q86XK3 245 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 FEZF2Q8TBJ5 459 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 ZMAT2Q96NC0 199 aaKnown RBP16.14■□□□□ 0.17
USE1-202ENST00000445667 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 SSX2IPQ9Y2D8 614 aa16.14■□□□□ 0.17
USE1-202ENST00000445667 MYBP10242 640 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
USE1-202ENST00000445667 GTF2BQ00403 316 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 CBX2Q14781 532 aaPredicted RBP16.13■□□□□ 0.17
USE1-202ENST00000445667 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 FAM171A1Q5VUB5 890 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 PRSS55Q6UWB4 352 aaPredicted RBP16.13■□□□□ 0.17
USE1-202ENST00000445667 CEP57Q86XR8 500 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 GLYCTKQ8IVS8 523 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 STAMQ92783 540 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 KCNN1Q92952 543 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 SNX27Q96L92 541 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 FBXL18Q96ME1 805 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 PHF7Q9BWX1 381 aaPredicted RBP16.13■□□□□ 0.17
USE1-202ENST00000445667 ADAM7Q9H2U9 754 aa16.13■□□□□ 0.17
USE1-202ENST00000445667 SF3B1O75533 1304 aaKnown RBP eCLIP16.13■□□□□ 0.17
USE1-202ENST00000445667 HNRNPDLO14979 420 aaKnown RBP16.12■□□□□ 0.17
USE1-202ENST00000445667 CUTAO60888 179 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 ADH1AP07327 375 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 TNFSF9P41273 254 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
USE1-202ENST00000445667 ITIH3Q06033 890 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
USE1-202ENST00000445667 CES5AQ6NT32 575 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 DCLRE1AQ6PJP8 1040 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 TMC5Q6UXY8 1006 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
USE1-202ENST00000445667 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
USE1-202ENST00000445667 IKZF4Q9H2S9 585 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 CNTN3Q9P232 1028 aa16.12■□□□□ 0.17
USE1-202ENST00000445667 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms