RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 TRIM49P0CI25 452 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 TRIM49CP0CI26 452 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 MAPK7Q13164 816 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DRAP1Q14919 205 aaPredicted RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 EXOC3L1Q86VI1 746 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 SLC30A5Q8TAD4 765 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DYDC1Q8WWB3 177 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 NAP1L3Q99457 506 aaPredicted RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 STRA6Q9BX79 667 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 RNPEPL1Q9HAU8 725 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 ERVK-5Q9HDB9 667 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 NKX1-2Q9UD57 310 aaPredicted RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 SNX24Q9Y343 169 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DDX39AO00148 427 aaKnown RBP20.23■□□□□ 0.83
PMPCB-204ENST00000444457 RASGRF2O14827 1237 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 ITGB5P18084 799 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 ATP6V1C1P21283 382 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 HSD17B4P51659 736 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 LMNB2Q03252 620 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 GNPTABQ3T906 1256 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 TRIM68Q6AZZ1 485 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 LMNTD2Q8IXW0 634 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 DAW1Q8N136 415 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 GLG1Q92896 1179 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 ITFG2Q969R8 447 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 UTP4Q969X6 686 aaKnown RBP20.23■□□□□ 0.83
PMPCB-204ENST00000444457 UNC5CO95185 931 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 CALB2P22676 271 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 SLCO1A2P46721 670 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 GALCP54803 685 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 CCDC15Q0P6D6 951 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 NUGGCQ68CJ6 796 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 SLC9A9Q8IVB4 645 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 FBF1Q8TES7 1133 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 AGBL1Q96MI9 1066 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 GPR88Q9GZN0 384 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 INTS2Q9H0H0 1204 aaKnown RBP20.23■□□□□ 0.83
PMPCB-204ENST00000444457 CARD9Q9H257 536 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.23■□□□□ 0.83
PMPCB-204ENST00000444457 RASAL2Q9UJF2 1139 aa20.23■□□□□ 0.83
PMPCB-204ENST00000444457 RIPK2O43353 540 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 UPP2O95045 317 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 PTGER2P43116 358 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 MXRA7P84157 204 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 MYL7Q01449 175 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 BFSP1Q12934 665 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 PARP6Q2NL67 630 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 LARGE2Q8N3Y3 721 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 RMDN2Q96LZ7 410 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 CCPG1Q9ULG6 757 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
PMPCB-204ENST00000444457 EXOC3O60645 756 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 BCRP11274 1271 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 LMNB1P20700 586 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 CNGA1P29973 690 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 LRRC14Q15048 493 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 RNF43Q68DV7 783 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 MIER3Q7Z3K6 550 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 GLYCTKQ8IVS8 523 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 SYT11Q9BT88 431 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 APEX2Q9UBZ4 518 aa20.22■□□□□ 0.83
PMPCB-204ENST00000444457 DBR1Q9UK59 544 aaKnown RBP20.22■□□□□ 0.83
PMPCB-204ENST00000444457 K7ENM7 598 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ICAM1P05362 532 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 COPB2P35606 906 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 TUBP50607 506 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 PADI6Q6TGC4 694 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 FAM43BQ6ZT52 329 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ANKLE1Q8NAG6 615 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 DRAXINQ8NBI3 349 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 TEKT4Q8WW24 435 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ROPN1BQ9BZX4 212 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ROPN1Q9HAT0 212 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 PKD2L1Q9P0L9 805 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 COL20A1Q9P218 1284 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 NCANO14594 1321 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ZNF536O15090 1300 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 PEX11AO75192 247 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 FAM83AQ86UY5 434 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 STK32AQ8WU08 396 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 CKAP2Q8WWK9 683 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 KCNH7Q9NS40 1196 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 CTNNAL1Q9UBT7 734 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 MTRF1LQ9UGC7 380 aaKnown RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 PARP2Q9UGN5 583 aa20.21■□□□□ 0.83
PMPCB-204ENST00000444457 ZMYND8Q9ULU4 1186 aaPredicted RBP20.21■□□□□ 0.83
PMPCB-204ENST00000444457 PTGIRP43119 386 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 MGAT5Q09328 741 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 MKRN3Q13064 507 aaKnown RBP20.2■□□□□ 0.82
PMPCB-204ENST00000444457 MYBPC2Q14324 1141 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 CLUL1Q15846 466 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 RTKN2Q8IZC4 609 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms