RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SPATA31D4Q6ZUB0 917 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 RIN2Q8WYP3 895 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 CDK5RAP3Q96JB5 506 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 AK8Q96MA6 479 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 CLIC6Q96NY7 704 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 FIZ1Q96SL8 496 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 NTPCRQ9BSD7 190 aaKnown RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 COLEC11Q9BWP8 271 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 EMILIN2Q9BXX0 1053 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 MRPL4Q9BYD3 311 aaKnown RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 MAN1C1Q9NR34 630 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 I3L4J1 428 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
SF3A1-203ENST00000444440 RFPL2O75678 378 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
SF3A1-203ENST00000444440 LONP1P36776 959 aaKnown RBP11.93□□□□□ -0.5
SF3A1-203ENST00000444440 CLCNKBP51801 687 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 NCKAP1LP55160 1127 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 CEBPZQ03701 1054 aaKnown RBP11.93□□□□□ -0.5
SF3A1-203ENST00000444440 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 CES5AQ6NT32 575 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 GPR149Q86SP6 731 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 PPFIBP1Q86W92 1011 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 GPBP1Q86WP2 473 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 PALB2Q86YC2 1186 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 TMEM87AQ8NBN3 555 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 RAD54LQ92698 747 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 EDAQ92838 391 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 INTS4Q96HW7 963 aaKnown RBP11.93□□□□□ -0.5
SF3A1-203ENST00000444440 SNX27Q96L92 541 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 TIPINQ9BVW5 301 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 SFXN1Q9H9B4 322 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 DENND4CQ5VZ89 1909 aa11.93□□□□□ -0.5
SF3A1-203ENST00000444440 SF3B1O75533 1304 aaKnown RBP eCLIP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 DMDP11532 3685 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 COL4A3Q01955 1670 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 A0A087X0B3 334 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 TGM5O43548 720 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 TADA2AO75478 443 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 BRD1O95696 1058 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 ASGR2P07307 311 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 UBA7P41226 1012 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 MTHFRP42898 656 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 BRCC3P46736 316 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 ZNF131P52739 623 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 ZXDAP98168 799 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 RSPO2Q6UXX9 243 aaPredicted RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 C18orf25Q96B23 403 aaPredicted RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 ZNF707Q96C28 371 aaPredicted RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 CALML4Q96GE6 196 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 CCSER1Q9C0I3 900 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 IKZF4Q9H2S9 585 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 C17orf75Q9HAS0 396 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 ANKFY1Q9P2R3 1169 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 STK39Q9UEW8 545 aa11.92□□□□□ -0.5
SF3A1-203ENST00000444440 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
SF3A1-203ENST00000444440 USP34Q70CQ2 3546 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 OBSL1O75147 1896 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 FAM189A1O60320 539 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 NR1I2O75469 434 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 BMP15O95972 392 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 GLUD1P00367 558 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 ADH1AP07327 375 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 MCF2P10911 925 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 PDCP20941 246 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 TNFSF9P41273 254 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
SF3A1-203ENST00000444440 PTPN21Q16825 1174 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 UPP1Q16831 310 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 ZBTB41Q5SVQ8 909 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 SLC39A4Q6P5W5 647 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 PIK3R5Q8WYR1 880 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 ASIC4Q96FT7 647 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 RIPOR3Q96MK2 946 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 NECTIN4Q96NY8 510 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 KCND2Q9NZV8 630 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
SF3A1-203ENST00000444440 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
SF3A1-203ENST00000444440 VPS13AQ96RL7 3174 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 MIA3Q5JRA6 1907 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms