RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 HOXB4P17483 251 aaPredicted RBP8.3□□□□□ -1.08
SSXP3-201ENST00000442971 HOXA9P31269 272 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 ACTN2P35609 894 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 DCTP40126 519 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 NEDD9Q14511 834 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 LIN9Q5TKA1 542 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 TMPRSS12Q86WS5 348 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 DAGLBQ8NCG7 672 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 SPATA20Q8TB22 786 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 RSPH1Q8WYR4 309 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 NAF1Q96HR8 494 aaKnown RBP8.3□□□□□ -1.08
SSXP3-201ENST00000442971 MBOAT7Q96N66 472 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 TPSD1Q9BZJ3 242 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 NRSN2Q9GZP1 204 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 ARPP21Q9UBL0 812 aaPredicted RBP8.3□□□□□ -1.08
SSXP3-201ENST00000442971 A0A0U1RQF3 1178 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 PRDM1O75626 825 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 CEBPBP17676 345 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 ITGB6P18564 788 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 ITPKAP23677 461 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 AFMP43652 599 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 DSG1Q02413 1049 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 SP4Q02446 784 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 SLC5A9Q2M3M2 681 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 EML3Q32P44 896 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 LYSMD4Q5XG99 296 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 ZNF248Q8NDW4 579 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 BAHD1Q8TBE0 780 aaPredicted RBP8.29□□□□□ -1.08
SSXP3-201ENST00000442971 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 ASB16Q96NS5 453 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 CDC6Q99741 560 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 PDCD2LQ9BRP1 358 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 FBXW11Q9UKB1 542 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 FAN1Q9Y2M0 1017 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 BRINP1O60477 761 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 ALDH2P05091 517 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 POU2F2P09086 479 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 SKIP12755 728 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TCF7P36402 384 aaPredicted RBP8.29□□□□□ -1.08
SSXP3-201ENST00000442971 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TBC1D25Q3MII6 688 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 NOMO2Q5JPE7 1267 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 DHRS13Q6UX07 377 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 MCF2L2Q86YR7 1114 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 MFSD6LQ8IWD5 586 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TTC8Q8TAM2 541 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 DCAF4Q8WV16 495 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 TMPRSS4Q9NRS4 437 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSXP3-201ENST00000442971 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 PCDHA1Q9Y5I3 950 aa8.29□□□□□ -1.08
SSXP3-201ENST00000442971 PLIN4Q96Q06 1357 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 PHLPP2Q6ZVD8 1323 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
SSXP3-201ENST00000442971 JUPP14923 745 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 COL8A1P27658 744 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 VIPR2P41587 438 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 CRYBB1P53674 252 aaPredicted RBP8.28□□□□□ -1.08
SSXP3-201ENST00000442971 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 PLCB4Q15147 1175 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 CCDC157Q569K6 752 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 XKR5Q6UX68 686 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 SYT13Q7L8C5 426 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 RABEPKQ7Z6M1 372 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 RNF168Q8IYW5 571 aaPredicted RBP8.28□□□□□ -1.08
SSXP3-201ENST00000442971 TRAPPC12Q8WVT3 735 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 TMEM209Q96SK2 561 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 OSMRQ99650 979 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 STX8Q9UNK0 236 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 INPP5FQ9Y2H2 1132 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 SLC4A4Q9Y6R1 1079 aa8.28□□□□□ -1.08
SSXP3-201ENST00000442971 MYH7P12883 1935 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
SSXP3-201ENST00000442971 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 MINDY4BA8MYZ0 360 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 NRP1O14786 923 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 CHADO15335 359 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 RNF40O75150 1001 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 DDHD2O94830 711 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 RHOP08100 348 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 HNF1BP35680 557 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 DMC1Q14565 340 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 PGM5Q15124 567 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 KIZQ2M2Z5 673 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 SBK1Q52WX2 424 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 SPDYCQ5MJ68 293 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 GLB1LQ6UWU2 654 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 YAF2Q8IY57 180 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 IL31RAQ8NI17 732 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 SMARCD2Q92925 531 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms