RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SYCE1LA8MT33 242 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 PDHXO00330 501 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 FBP2O00757 339 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 IKBKBO14920 756 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ZBTB7BO15156 539 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 LARGE1O95461 756 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 CYP2C9P11712 490 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 IFNA8P32881 189 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 RGS2P41220 211 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 PTDSS1P48651 473 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 MAGOHP61326 146 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 LSAMPQ13449 338 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 RASA2Q15283 850 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 PCSK7Q16549 785 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 KRT40Q6A162 431 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 STYK1Q6J9G0 422 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 MARK2Q7KZI7 788 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 NECAB2Q7Z6G3 386 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 GATAD2AQ86YP4 633 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 TSEN2Q8NCE0 465 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 RNF169Q8NCN4 708 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 LSM14AQ8ND56 463 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 FLCNQ8NFG4 579 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 MAGOHBQ96A72 148 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 FAM122AQ96E09 287 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 HSPBAP1Q96EW2 488 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 XPO6Q96QU8 1125 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 STK33Q9BYT3 514 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 CNOT10Q9H9A5 744 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 EPB41L5Q9HCM4 733 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 QPCTLQ9NXS2 382 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 TTC7AQ9ULT0 858 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 GABRQQ9UN88 632 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 NFE2L3Q9Y4A8 694 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SNX14Q9Y5W7 946 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 BRCA1P38398 1863 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 ARHGAP10A1A4S6 786 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SNTNA6NMZ2 147 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 BBOX1O75936 387 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 HEXIM1O94992 359 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 BAG2O95816 211 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ADH1BP00325 375 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 PGK1P00558 417 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 INHAP05111 366 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 POLR3DP05423 398 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 CFHP08603 1231 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 OCM2P0CE71 109 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 OCMP0CE72 109 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 PRKACAP17612 351 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 VARSP26640 1264 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 SCNN1AP37088 669 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ADCY8P40145 1251 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 KRT76Q01546 638 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 CETN1Q12798 172 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 COL19A1Q14993 1142 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 C16orf72Q14CZ0 275 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SPA17Q15506 151 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 BBS9Q3SYG4 887 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 RC3H1Q5TC82 1133 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 PDXDC1Q6P996 788 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 RSBN1LQ6PCB5 846 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 TMC5Q6UXY8 1006 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SNX32Q86XE0 403 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 RASAL3Q86YV0 1011 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 TREML1Q86YW5 311 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SPERTQ8NA61 448 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 MGARPQ8TDB4 240 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 DTX3LQ8TDB6 740 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 NAT14Q8WUY8 206 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 OMA1Q96E52 524 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 GAS2L1Q99501 681 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 LRRC1Q9BTT6 524 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 HAUS4Q9H6D7 363 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 UBN1Q9NPG3 1134 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 INIPQ9NRY2 104 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 GIMAP4Q9NUV9 329 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 NDUFA13Q9P0J0 144 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 HESX1Q9UBX0 185 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 STX8Q9UNK0 236 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 FAM32AQ9Y421 112 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 CEP295Q9C0D2 2601 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 PASKQ96RG2 1323 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ADCY9O60503 1353 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ESYT3A0FGR9 886 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 BICDL2A1A5D9 508 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 WDR91A4D1P6 747 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SOX1O00570 391 aaPredicted RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 CHEK2O96017 543 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 ATP1A1P05023 1023 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 CYP1A2P05177 515 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 FYNP06241 537 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 HMOX2P30519 316 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 S100A5P33763 92 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SERPINB6P35237 376 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 KRT9P35527 623 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SYKP43405 635 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 CCT4P50991 539 aaKnown RBP2.95□□□□□ -1.94
LIG4-203ENST00000442234 ARFIP2P53365 341 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 KRT83P78385 493 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms