RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 MCAMP43121 646 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 ADKP55263 362 aaKnown RBP4.56□□□□□ -1.68
VPS41-207ENST00000439468 TBX4P57082 545 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 MALLQ13021 153 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 SEPT2Q15019 361 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 UBE3CQ15386 1083 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 B3GNT9Q6UX72 402 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 BTNL9Q6UXG8 535 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 TAS1R1Q7RTX1 841 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 APBB1IPQ7Z5R6 666 aaPredicted RBP4.56□□□□□ -1.68
VPS41-207ENST00000439468 MDGA1Q8NFP4 955 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 RSAD2Q8WXG1 361 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 KAT5Q92993 513 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 ZNF703Q9H7S9 590 aaPredicted RBP4.56□□□□□ -1.68
VPS41-207ENST00000439468 IPPQ9Y573 584 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 KLRG2A4D1S0 409 aaPredicted RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 WNT10BO00744 389 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 AKR1B10O60218 316 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 GYPEP15421 78 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 CTSSP25774 331 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 GZMKP49863 264 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 RABGGTBP53611 331 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 TGFB2P61812 414 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 GRM3Q14832 879 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 MUM1L1Q5H9M0 696 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 CCDC181Q5TID7 509 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 CXorf57Q6NSI4 855 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 Q6ZVL8 140 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 GRAMD1CQ8IYS0 662 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS41-207ENST00000439468 FBXO18Q8NFZ0 1043 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 PPP1R35Q8TAP8 253 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 SLC35G2Q8TBE7 412 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 CDC5LQ99459 802 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 ACO2Q99798 780 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 ADI1Q9BV57 179 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 GREM2Q9H772 168 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 NRDE2Q9H7Z3 1164 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 SPON1Q9HCB6 807 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 OBP2AQ9NY56 170 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 SAP30BPQ9UHR5 308 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 EIF2B4Q9UI10 523 aaKnown RBP4.55□□□□□ -1.68
VPS41-207ENST00000439468 SORCS3Q9UPU3 1222 aa4.55□□□□□ -1.68
VPS41-207ENST00000439468 XDHP47989 1333 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 A6NNZ2 444 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 PRR5-ARHGAP8B1AHC4 643 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 PRC1O43663 620 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 AKAP5P24588 427 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 GNALP38405 381 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 WNT3AP56704 352 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 GTF2H3Q13889 308 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 TOB2Q14106 344 aaPredicted RBP4.54□□□□□ -1.68
VPS41-207ENST00000439468 LLGL1Q15334 1064 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 ANO4Q32M45 955 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 GFOD2Q3B7J2 385 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 MINDY4Q4G0A6 757 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 ARHGAP29Q52LW3 1261 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 RABL3Q5HYI8 236 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 ATAT1Q5SQI0 421 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 FNDC7Q5VTL7 733 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 SLC4A10Q6U841 1118 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 USP45Q70EL2 814 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 FAM83AQ86UY5 434 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 COL23A1Q86Y22 540 aaPredicted RBP4.54□□□□□ -1.68
VPS41-207ENST00000439468 XYLT1Q86Y38 959 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 SYNE4Q8N205 404 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 PRR18Q8N4B5 295 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 GPR156Q8NFN8 814 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 CPT1CQ8TCG5 803 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 SLC25A43Q8WUT9 341 aaPredicted RBP4.54□□□□□ -1.68
VPS41-207ENST00000439468 SSH1Q8WYL5 1049 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 HPS3Q969F9 1004 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 TAAR9Q96RI9 348 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 NUP88Q99567 741 aaPredicted RBP4.54□□□□□ -1.68
VPS41-207ENST00000439468 LDAHQ9H6V9 325 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 SIK3Q9Y2K2 1263 aa4.54□□□□□ -1.68
VPS41-207ENST00000439468 KIF3BO15066 747 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 ADCY6O43306 1168 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 SUV39H1O43463 412 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 CTNND1O60716 968 aaKnown RBP4.53□□□□□ -1.68
VPS41-207ENST00000439468 OFD1O75665 1012 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 RECQL4O94761 1208 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 SCAF4O95104 1147 aaKnown RBP4.53□□□□□ -1.68
VPS41-207ENST00000439468 ALDH2P05091 517 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 HSPA6P17066 643 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 PTGS2P35354 604 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 SLC6A9P48067 706 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 SLC16A1P53985 500 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 SLC25A3Q00325 362 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 DSC2Q02487 901 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 MRPL49Q13405 166 aaKnown RBP4.53□□□□□ -1.68
VPS41-207ENST00000439468 GALEQ14376 348 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 MAP9Q49MG5 647 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 DCAF17Q5H9S7 520 aaPredicted RBP4.53□□□□□ -1.68
VPS41-207ENST00000439468 RHOT1Q8IXI2 618 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 ZNF276Q8N554 614 aa4.53□□□□□ -1.68
VPS41-207ENST00000439468 LILRA3Q8N6C8 439 aaPredicted RBP4.53□□□□□ -1.68
VPS41-207ENST00000439468 ZBTB34Q8NCN2 500 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms