RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 DCLRE1AQ6PJP8 1040 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
PHF1-204ENST00000427826 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 RHOBTB2Q9BYZ6 727 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 PLEKHA4Q9H4M7 779 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 MAN1C1Q9NR34 630 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 SLC38A7Q9NVC3 462 aa16.62■□□□□ 0.25
PHF1-204ENST00000427826 SMIM28A0A1B0GU29 152 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 TMEM189-UBE2V1I3L0A0 370 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 TRAPPC3O43617 180 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 KIF4AO95239 1232 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 WEE2P0C1S8 567 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ABCD1P33897 745 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 PTPN21Q16825 1174 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 FAM171A1Q5VUB5 890 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ZPBP2Q6X784 338 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ZBTB33Q86T24 672 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 GPBP1Q86WP2 473 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
PHF1-204ENST00000427826 KCNN1Q92952 543 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
PHF1-204ENST00000427826 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
PHF1-204ENST00000427826 B3GALT6Q96L58 329 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
PHF1-204ENST00000427826 ZSCAN16Q9H4T2 348 aaPredicted RBP16.61■□□□□ 0.25
PHF1-204ENST00000427826 TDRD15B5MCY1 1934 aaKnown RBP16.6■□□□□ 0.25
PHF1-204ENST00000427826 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CLDN3O15551 220 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 B3GAT3O94766 335 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 FAM13AO94988 1023 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 KRT18P05783 430 aaKnown RBP16.6■□□□□ 0.25
PHF1-204ENST00000427826 PLCG1P19174 1290 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 DDIT3P35638 169 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 OSTNP61366 133 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 RESTQ13127 1097 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.259e-9■□□□□ 9.2
PHF1-204ENST00000427826 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
PHF1-204ENST00000427826 KANK3Q6NY19 840 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
PHF1-204ENST00000427826 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 MYCT1Q8N699 235 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 HASPINQ8TF76 798 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 RAD54LQ92698 747 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CXCL16Q9H2A7 254 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 PARVGQ9HBI0 331 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CACNG4Q9UBN1 327 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 RAPGEFL1Q9UHV5 662 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CDH22Q9UJ99 828 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
PHF1-204ENST00000427826 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
PHF1-204ENST00000427826 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 C2CD4DB7Z1M9 353 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 ABLIM1O14639 778 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 TGM5O43548 720 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 KCNE1P15382 129 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 SP100P23497 879 aaPredicted RBP16.59■□□□□ 0.25
PHF1-204ENST00000427826 TXLNAP40222 546 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 GRIN1Q05586 938 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 SIGLEC14Q08ET2 396 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 DHX8Q14562 1220 aaKnown RBP16.59■□□□□ 0.25
PHF1-204ENST00000427826 MCM6Q14566 821 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 PTPAQ15257 358 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 KYAT1Q16773 422 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 UPP1Q16831 310 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 RTP2Q5QGT7 225 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 OTOP3Q7RTS5 596 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 HAUS6Q7Z4H7 955 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 BMP8AQ7Z5Y6 402 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 CEP120Q8N960 986 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 LARP4BQ92615 738 aaKnown RBP16.59■□□□□ 0.25
PHF1-204ENST00000427826 BICD1Q96G01 975 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 SNX27Q96L92 541 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
PHF1-204ENST00000427826 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
PHF1-204ENST00000427826 TMEM221A6NGB7 291 aa16.58■□□□□ 0.24
PHF1-204ENST00000427826 M0R296 226 aa16.58■□□□□ 0.24
PHF1-204ENST00000427826 STX6O43752 255 aa16.58■□□□□ 0.24
PHF1-204ENST00000427826 TBCAO75347 108 aaKnown RBP16.58■□□□□ 0.24
PHF1-204ENST00000427826 HARSP12081 509 aaKnown RBP16.58■□□□□ 0.24
PHF1-204ENST00000427826 PDIA4P13667 645 aaKnown RBP16.58■□□□□ 0.24
PHF1-204ENST00000427826 RPL9P32969 192 aaKnown RBP16.58■□□□□ 0.24
PHF1-204ENST00000427826 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms