RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 CLUHO75153 1309 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 SMCHD1A6NHR9 2005 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-203ENST00000420489 HOXC8P31273 242 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 ID3Q02535 119 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 SMAD1Q15797 465 aaKnown RBP4.47□□□□□ -1.69
CNGA1-203ENST00000420489 CAVIN4Q5BKX8 364 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 DTHD1Q6ZMT9 781 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 MAMDC2Q7Z304 686 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-203ENST00000420489 FBLIM1Q8WUP2 373 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 ZDHHC5Q9C0B5 715 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 CEP44Q9C0F1 390 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 PIDD1Q9HB75 910 aa4.47□□□□□ -1.69
CNGA1-203ENST00000420489 TNRC6BQ9UPQ9 1833 aaKnown RBP4.47□□□□□ -1.69
CNGA1-203ENST00000420489 A0A087X0B3 334 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 SHOX2O60902 331 aaPredicted RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 ECI2O75521 394 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 RPP40O75818 363 aaKnown RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 CAPN3P20807 821 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 PTGER4P35408 488 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 CACNB3P54284 484 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 PDE4BQ07343 736 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 SHROOM1Q2M3G4 852 aaPredicted RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 TIPARPQ7Z3E1 657 aaKnown RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 SSC4DQ8WTU2 575 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 HIC2Q96JB3 615 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 IFIH1Q9BYX4 1025 aaKnown RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 ABCB6Q9NP58 842 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 GTF2IRD1Q9UHL9 959 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 ANAPC2Q9UJX6 822 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 PCOLCE2Q9UKZ9 415 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 PPM1HQ9ULR3 514 aa4.46□□□□□ -1.69
CNGA1-203ENST00000420489 OAS3Q9Y6K5 1087 aaKnown RBP4.46□□□□□ -1.69
CNGA1-203ENST00000420489 METTL12A8MUP2 240 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 NARSO43776 548 aaKnown RBP4.46□□□□□ -1.7
CNGA1-203ENST00000420489 MED26O95402 600 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 FTH1P19P0C7X4 201 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 JUNBP17275 347 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-203ENST00000420489 KLRC3Q07444 240 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 PLK5Q496M5 336 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 SPTY2D1Q68D10 685 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-203ENST00000420489 OGFOD3Q6PK18 319 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 MYOCDQ8IZQ8 938 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 HDDC3Q8N4P3 179 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 BAHD1Q8TBE0 780 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-203ENST00000420489 TRIM56Q9BRZ2 755 aaKnown RBP4.46□□□□□ -1.7
CNGA1-203ENST00000420489 FOXQ1Q9C009 403 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 EBF1Q9UH73 591 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 SYNPO2Q9UMS6 1093 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 AP4E1Q9UPM8 1137 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 SSX2IPQ9Y2D8 614 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 PCDHGA1Q9Y5H4 931 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 LAMA4Q16363 1823 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 PTPN13Q12923 2485 aa4.46□□□□□ -1.7
CNGA1-203ENST00000420489 GPR75-ASB3A0A0A6YYF3 556 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 LNP1A1A4G5 178 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF862O60290 1169 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ATG13O75143 517 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 PPFIA2O75334 1257 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 PTMSP20962 102 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 LRRC14Q15048 493 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ALG1LQ6GMV1 187 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ARMCX2Q7L311 632 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 MRPL43Q8N983 215 aaKnown RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 MDM1Q8TC05 714 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF578Q96N58 590 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 CTAGE1Q96RT6 745 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 NUSAP1Q9BXS6 441 aaKnown RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 GREM2Q9H772 168 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 GOLGA2P5Q9HBQ8 144 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 NAP1L2Q9ULW6 460 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ABCB11O95342 1321 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ABCA2Q9BZC7 2435 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 CHURC1-FNTBB4DL54 471 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 HAS3O00219 553 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 CBFA2T3O75081 653 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 DLGAP3O95886 979 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 GSTP1P09211 210 aaKnown RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 FNTBP49356 437 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 GSTO1P78417 241 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ORC1Q13415 861 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 GRM2Q14416 872 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 SMTNL2Q2TAL5 461 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 KIAA1211LQ6NV74 962 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 ZNF280BQ86YH2 543 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 EXOC8Q8IYI6 725 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 MMP21Q8N119 569 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 FGF11Q92914 225 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 RPAP3Q9H6T3 665 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 MRPL42Q9Y6G3 142 aaKnown RBP4.45□□□□□ -1.7
CNGA1-203ENST00000420489 CFAP54Q96N23 3096 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 USP34Q70CQ2 3546 aa4.45□□□□□ -1.7
CNGA1-203ENST00000420489 LRG1P02750 347 aa4.44□□□□□ -1.7
CNGA1-203ENST00000420489 LDHCP07864 332 aa4.44□□□□□ -1.7
CNGA1-203ENST00000420489 RAB6AP20340 208 aa4.44□□□□□ -1.7
CNGA1-203ENST00000420489 NME2P22392 152 aa4.44□□□□□ -1.7
CNGA1-203ENST00000420489 ARNTP27540 789 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms