RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLC5A4Q9NY91 659 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 DDTLA6NHG4 134 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-202ENST00000413219 DIAPH2O60879 1101 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 UNC5CO95185 931 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 ATF2P15336 505 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 PAX7P23759 505 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 KYNUQ16719 465 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 CEP55Q53EZ4 464 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 SLC30A10Q6XR72 485 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 SLC47A2Q86VL8 602 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 GDAP1Q8TB36 358 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 RMDN2Q96LZ7 410 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 LXNQ9BS40 222 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 MRIQ9BWK5 157 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 TEKT3Q9BXF9 490 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 PCIF1Q9H4Z3 704 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 HSPBP1Q9NZL4 362 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 ADAM22Q9P0K1 906 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 CTNNAL1Q9UBT7 734 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 ANAPC5Q9UJX4 755 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 PRR12Q9ULL5 1215 aa18.82■□□□□ 0.6
SDCBP-202ENST00000413219 POLR2MP0CAP2 368 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CYP11B1P15538 503 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 TAL1P17542 331 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CENPCQ03188 943 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 PARP6Q2NL67 630 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ACAD10Q6JQN1 1059 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CEP128Q6ZU80 1094 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ANKRD35Q8N283 1001 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 KIF2BQ8N4N8 673 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ATL2Q8NHH9 583 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 PRCCQ92733 491 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ZNF577Q9BSK1 485 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 DCLK3Q9C098 648 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CCDC189A1A4V9 331 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 GH1P01241 217 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
SDCBP-202ENST00000413219 TAC1P20366 129 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-202ENST00000413219 VPS72Q15906 364 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 PADI6Q6TGC4 694 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.81■□□□□ 0.6
SDCBP-202ENST00000413219 PLEKHO2Q8TD55 490 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CBWD1Q9BRT8 395 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 FOXP3Q9BZS1 431 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 ST6GALNAC4Q9H4F1 302 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CHST7Q9NS84 486 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 NAALADL1Q9UQQ1 740 aa18.81■□□□□ 0.6
SDCBP-202ENST00000413219 CLGNO14967 610 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 MAGEB2O15479 319 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 ABHD2P08910 425 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 GYS1P13807 737 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 SLC1A1P43005 524 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 IL9RQ01113 521 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 MGAT5Q09328 741 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 SNX1Q13596 522 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 ZKSCAN8Q15776 578 aaPredicted RBP18.8■□□□□ 0.6
SDCBP-202ENST00000413219 ERICH1Q86X53 443 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 KIFAP3Q92845 792 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 FAM81BQ96LP2 452 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 RIT2Q99578 217 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 AVENQ9NQS1 362 aaPredicted RBP18.8■□□□□ 0.6
SDCBP-202ENST00000413219 EURLQ9NYK6 297 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 FAM198AQ9UFP1 575 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 STK38LQ9Y2H1 464 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 MYH11P35749 1972 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 LUC7L3O95232 432 aaKnown RBP18.8■□□□□ 0.6
SDCBP-202ENST00000413219 CFBP00751 764 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 VIL1P09327 827 aaKnown RBP18.8■□□□□ 0.6
SDCBP-202ENST00000413219 PTP4A2Q12974 167 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 NR1H3Q13133 447 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 SH3BP5LQ7L8J4 393 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 ECHDC2Q86YB7 292 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 CYP4X1Q8N118 509 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 MLXIPLQ9NP71 852 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 UBN1Q9NPG3 1134 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 COQ4Q9Y3A0 265 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 STARD13Q9Y3M8 1113 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 NEU2Q9Y3R4 380 aa18.8■□□□□ 0.6
SDCBP-202ENST00000413219 A8MUI8 341 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 NEBLO76041 1014 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 PLS3P13797 630 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 MAPK4P31152 587 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 ADCY8P40145 1251 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 GTF2BQ00403 316 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 TCP10Q12799 353 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 CLEC16AQ2KHT3 1053 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 SPICE1Q8N0Z3 855 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 ANKLE1Q8NAG6 615 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 DDX1Q92499 740 aaKnown RBP18.79■□□□□ 0.6
SDCBP-202ENST00000413219 IWS1Q96ST2 819 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 PITPNM3Q9BZ71 974 aa18.79■□□□□ 0.6
SDCBP-202ENST00000413219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.79■□□□□ 0.6
SDCBP-202ENST00000413219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.78■□□□□ 0.6
SDCBP-202ENST00000413219 TISP43B9A030 160 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 GPC3P51654 580 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms