RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ZMYND8Q9ULU4 1186 aaPredicted RBP16.58■□□□□ 0.24
AP1S3-204ENST00000409375 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
AP1S3-204ENST00000409375 TET1Q8NFU7 2136 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 MICAL3Q7RTP6 2002 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 RALGAPA2Q2PPJ7 1873 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 LTBP2Q14767 1821 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
AP1S3-204ENST00000409375 N4BP1O75113 896 aaKnown RBP16.57■□□□□ 0.24
AP1S3-204ENST00000409375 FGBP02675 491 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 AMHP03971 560 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 CXCL8P10145 99 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 SYN1P17600 705 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 TNNI1P19237 187 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 TNFSF9P41273 254 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 FAM189BP81408 668 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 CETN1Q12798 172 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 ENOX2Q16206 610 aaKnown RBP16.57■□□□□ 0.24
AP1S3-204ENST00000409375 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 WDR49Q8IV35 697 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 RNF169Q8NCN4 708 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 PARD3BQ8TEW8 1205 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
AP1S3-204ENST00000409375 CCDC127Q96BQ5 260 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 SNX27Q96L92 541 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 RSAD1Q9HA92 442 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 DERAQ9Y315 318 aa16.57■□□□□ 0.24
AP1S3-204ENST00000409375 TTC26A0AVF1 554 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 DLATP10515 647 aaKnown RBP16.56■□□□□ 0.24
AP1S3-204ENST00000409375 GTF2H1P32780 548 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 KRT31Q15323 416 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 GLB1LQ6UWU2 654 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 RTN4RL1Q86UN2 441 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-204ENST00000409375 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 LINC01599Q8WXQ3 324 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 BORCS6Q96GS4 357 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 ANKRD36BP1Q96IX9 119 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 HES2Q9Y543 173 aa16.56■□□□□ 0.24
AP1S3-204ENST00000409375 LRRC10BA6NIK2 292 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 LACTBL1A8MY62 500 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 TNNC2P02585 160 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 AFPP02771 609 aaKnown RBP16.55■□□□□ 0.24
AP1S3-204ENST00000409375 ATP1A3P13637 1013 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 IBSPP21815 317 aaPredicted RBP16.55■□□□□ 0.24
AP1S3-204ENST00000409375 AKAP5P24588 427 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
AP1S3-204ENST00000409375 MCCD1P59942 119 aaPredicted RBP16.55■□□□□ 0.24
AP1S3-204ENST00000409375 FANCCQ00597 558 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 TMEM132DQ14C87 1099 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 SLC10A6Q3KNW5 377 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 TMEM192Q8IY95 271 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 URGCPQ8TCY9 931 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 GRPEL1Q9HAV7 217 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 PDE11AQ9HCR9 933 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 SLC38A7Q9NVC3 462 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 TAB2Q9NYJ8 693 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 CNTN3Q9P232 1028 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 KANSL3Q9P2N6 904 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
AP1S3-204ENST00000409375 C2CD2Q9Y426 696 aa16.55■□□□□ 0.24
AP1S3-204ENST00000409375 LRRIQ3A6PVS8 624 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-204ENST00000409375 P4HA2O15460 535 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 ACRP10323 421 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 MRE11P49959 708 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 CLDN10P78369 228 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 DUOXA2Q1HG44 320 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 VWA3BQ502W6 1294 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
AP1S3-204ENST00000409375 BEST2Q8NFU1 509 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
AP1S3-204ENST00000409375 SLC35C1Q96A29 364 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 VPS16Q9H269 839 aa16.54■□□□□ 0.24
AP1S3-204ENST00000409375 UBQLN1Q9UMX0 589 aaKnown RBP16.54■□□□□ 0.24
AP1S3-204ENST00000409375 TTC3P53804 2025 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-204ENST00000409375 ZBBXA8MT70 800 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 PHACTR2O75167 634 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 THP07101 528 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 TRIM49P0CI25 452 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 TRIM49CP0CI26 452 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 KCNE1P15382 129 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 ATF7P17544 494 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-204ENST00000409375 MLH1P40692 756 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 MXI1P50539 228 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 UBASH3AP57075 661 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 TFAMQ00059 246 aaKnown RBP16.53■□□□□ 0.24
AP1S3-204ENST00000409375 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 KRT39Q6A163 491 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 JADE1Q6IE81 842 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 ZNF365Q70YC5 407 aa16.53■□□□□ 0.24
AP1S3-204ENST00000409375 OTOP2Q7RTS6 562 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms