RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 DDX56Q9NY93 547 aaKnown RBP16.71■□□□□ 0.27
SSFA2-202ENST00000409001 TMEM120BA0PK00 339 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 ARL13BQ3SXY8 428 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 TMEM143Q96AN5 459 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 FBXO40Q9UH90 709 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 SARSP49591 514 aaKnown RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 PPP4CP60510 307 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 PLCB4Q15147 1175 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 THAP2Q9H0W7 228 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 TECPR2O15040 1411 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 PHKA2P46019 1235 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 ESRRGP62508 458 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 EXT2Q93063 718 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 DHX35Q9H5Z1 703 aaKnown RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 JPH1Q9HDC5 661 aaPredicted RBP16.7■□□□□ 0.26
SSFA2-202ENST00000409001 CREB3O43889 395 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 SATB1Q01826 763 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 OSBPL8Q9BZF1 889 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 CARD9Q9H257 536 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 SENP1Q9P0U3 644 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 LCMT1Q9UIC8 334 aa16.7■□□□□ 0.26
SSFA2-202ENST00000409001 EIF3EP60228 445 aaKnown RBP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 VPS39Q96JC1 886 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 A0A087X0B3 334 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 DGAT1O75907 488 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 CASP4P49662 377 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 NPEPPSP55786 919 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 DSTYKQ6XUX3 929 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 TRPM8Q7Z2W7 1104 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 NEU2Q9Y3R4 380 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 MED24O75448 989 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 PON1P27169 355 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 CIITAP33076 1130 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 ST13P4Q8IZP2 240 aaPredicted RBP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 BTBD6Q96KE9 485 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 RPAP3Q9H6T3 665 aaPredicted RBP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 THEGQ9P2T0 379 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 ANGPTL3Q9Y5C1 460 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 CCDC124Q96CT7 223 aaKnown RBP16.69■□□□□ 0.26
SSFA2-202ENST00000409001 PI4K2AQ9BTU6 479 aa16.69■□□□□ 0.26
SSFA2-202ENST00000409001 PIK3R2O00459 728 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 RSPH3Q86UC2 560 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 KIF2BQ8N4N8 673 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 RNF139Q8WU17 664 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 NCAPGQ9BPX3 1015 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 ANLNQ9NQW6 1124 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 COPS2P61201 443 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 C18orf8Q96DM3 657 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 AGPAT3Q9NRZ7 376 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 KCND2Q9NZV8 630 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 CPSF3Q9UKF6 684 aaKnown RBP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 FOXN3O00409 490 aaPredicted RBP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 PRLRP16471 622 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 CHRNA5P30532 468 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 SYDE1Q6ZW31 735 aaPredicted RBP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 ERP27Q96DN0 273 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 MSH4O15457 936 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 HMGCS2P54868 508 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 ARPP19P56211 112 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
SSFA2-202ENST00000409001 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
SSFA2-202ENST00000409001 TYK2P29597 1187 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 INTS5Q6P9B9 1019 aaKnown RBP16.67■□□□□ 0.26
SSFA2-202ENST00000409001 KLF6Q99612 283 aaPredicted RBP16.67■□□□□ 0.26
SSFA2-202ENST00000409001 C2orf40Q9H1Z8 148 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 FAM47DPA6NHR8 397 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 GNGT2O14610 69 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 SASH3O75995 380 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
SSFA2-202ENST00000409001 ITGA8P53708 1063 aa16.67■□□□□ 0.26
SSFA2-202ENST00000409001 TBX2Q13207 712 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms