RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 VNN1O95497 513 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 APLP1P51693 650 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 KIF22Q14807 665 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 CEP120Q8N960 986 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 OR5B17Q8NGF7 314 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 PI4K2AQ9BTU6 479 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 FAM49AQ9H0Q0 323 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-205ENST00000401607 SMIM35A0A1B0GVV1 85 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 ZC3H11AO75152 810 aaKnown RBP eCLIP27.68■■■□□ 2.02
CPNE1-205ENST00000401607 HLA-DRAP01903 254 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 GTF2F1P35269 517 aaKnown RBP eCLIP27.68■■■□□ 2.026e-10■■■□□ 14.7
CPNE1-205ENST00000401607 GJA9P57773 515 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 RUFY4Q6ZNE9 571 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 TATDN2Q93075 761 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 KATNAL1Q9BW62 490 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 CFHR5Q9BXR6 569 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 ADAMTS10Q9H324 1103 aa27.68■■■□□ 2.02
CPNE1-205ENST00000401607 GPR25O00155 361 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 URI1O94763 535 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-205ENST00000401607 SRGAP1Q7Z6B7 1085 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 THNSL1Q8IYQ7 743 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 SCLT1Q96NL6 688 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 PDZD7Q9H5P4 517 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 RNF186Q9NXI6 227 aa27.67■■■□□ 2.02
CPNE1-205ENST00000401607 DDX3XO00571 662 aaKnown RBP eCLIP27.66■■■□□ 2.021e-13■■■□□ 15.3
CPNE1-205ENST00000401607 C6orf222P0C671 652 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-205ENST00000401607 CCDC172P0C7W6 258 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 CYP2C9P11712 490 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 ARF4P18085 180 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-205ENST00000401607 MFAP3P55082 362 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 BIRC3Q13489 604 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 WDR49Q8IV35 697 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 LNX1Q8TBB1 728 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-205ENST00000401607 SHC3Q92529 594 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 CPB2Q96IY4 423 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 NAGPAQ9UK23 515 aa27.66■■■□□ 2.02
CPNE1-205ENST00000401607 MACROD2A1Z1Q3 448 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 TSPAN1O60635 241 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 PIK3CAP42336 1068 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 CACNB2Q08289 660 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-205ENST00000401607 TMEM62Q0P6H9 643 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 BMS1Q14692 1282 aaKnown RBP27.65■■■□□ 2.02
CPNE1-205ENST00000401607 KIZQ2M2Z5 673 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 SLC30A5Q8TAD4 765 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 UPF3AQ9H1J1 476 aaKnown RBP27.65■■■□□ 2.02
CPNE1-205ENST00000401607 GPR32O75388 356 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 HOXC8P31273 242 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 VPS36Q86VN1 386 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 FAM71AQ8IYT1 594 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 TXLNBQ8N3L3 684 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 SECISBP2LQ93073 1101 aaKnown RBP27.65■■■□□ 2.02
CPNE1-205ENST00000401607 PACSIN1Q9BY11 444 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 LUC7LQ9NQ29 371 aaKnown RBP27.65■■■□□ 2.02
CPNE1-205ENST00000401607 SALL4Q9UJQ4 1053 aa27.65■■■□□ 2.02
CPNE1-205ENST00000401607 SEPT4O43236 478 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 TREHO43280 583 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 MCF2P10911 925 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 OSTNP61366 133 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 ZNF200P98182 395 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-205ENST00000401607 GCNT1Q02742 428 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 SURF1Q15526 300 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 NAB2Q15742 525 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 TMEM192Q8IY95 271 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 HDAC6Q9UBN7 1215 aa27.64■■■□□ 2.02
CPNE1-205ENST00000401607 AP3M2P53677 418 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 C10orf76Q5T2E6 689 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 ALKBH5Q6P6C2 394 aaKnown RBP27.63■■■□□ 2.01
CPNE1-205ENST00000401607 FAM212AQ96EL1 285 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 CDHR5Q9HBB8 845 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 C1orf112Q9NSG2 853 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 ANK1P16157 1881 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 CTAGE9A4FU28 777 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 KPNA6O60684 536 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 TRPA1O75762 1119 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 PGK1P00558 417 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 NKX3-2P78367 333 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 CDC42EP1Q00587 391 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 SCARA3Q6AZY7 606 aa27.63■■■□□ 2.01
CPNE1-205ENST00000401607 NAPGQ99747 312 aaPredicted RBP27.63■■■□□ 2.01
CPNE1-205ENST00000401607 C17orf102A2RUQ5 167 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 ERLIN2O94905 339 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 ELNP15502 786 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 FGFR4P22455 802 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 GNASQ5JWF2 1037 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 ENOSF1Q7L5Y1 443 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 GLYCTKQ8IVS8 523 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 DNAJB3Q8WWF6 145 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 APOBEC3GQ9HC16 384 aaKnown RBP27.62■■■□□ 2.01
CPNE1-205ENST00000401607 MRFAP1Q9Y605 127 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 CAPN6Q9Y6Q1 641 aa27.62■■■□□ 2.01
CPNE1-205ENST00000401607 ATP8B3O60423 1300 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 MEFVO15553 781 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-205ENST00000401607 CXCL8P10145 99 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 USP8P40818 1118 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 WDR44Q5JSH3 913 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 SPOPLQ6IQ16 392 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 EFCAB13Q8IY85 973 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 CD99L2Q8TCZ2 262 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 SLC20A1Q8WUM9 679 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 DHX38Q92620 1227 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms