RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CACNA2D4Q7Z3S7 1137 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 SRGAP1Q7Z6B7 1085 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 KBTBD6Q86V97 674 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 WDR5BQ86VZ2 330 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 MBOAT7Q96N66 472 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 VPS45Q9NRW7 570 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 CHST7Q9NS84 486 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 HCFC1R1Q9NWW0 138 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 FNIP2Q9P278 1114 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 MRPS23Q9Y3D9 190 aaKnown RBP10.52□□□□□ -0.73
NEDD9-203ENST00000397378 NEUROG3Q9Y4Z2 214 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 PIAS3Q9Y6X2 628 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 COL4A2P08572 1712 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 NID2Q14112 1375 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 SPAG17Q6Q759 2223 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 SDK1Q7Z5N4 2213 aa10.52□□□□□ -0.73
NEDD9-203ENST00000397378 NR1I2O75469 434 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 RPP40O75818 363 aaKnown RBP10.51□□□□□ -0.73
NEDD9-203ENST00000397378 CEACAM1P13688 526 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 CCNE1P24864 410 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 RAP1GAPP47736 663 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 LRRC32Q14392 662 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 USP41Q3LFD5 358 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 Q4G0T1 1027 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 FUT10Q6P4F1 479 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 ANO5Q75V66 913 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 PROSER1Q86XN7 944 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 ADAM32Q8TC27 787 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 IRF7Q92985 503 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 ELSPBP1Q96BH3 223 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 BBC3Q96PG8 261 aaPredicted RBP10.51□□□□□ -0.73
NEDD9-203ENST00000397378 SH2D3AQ9BRG2 576 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 TRMT61BQ9BVS5 477 aaKnown RBP10.51□□□□□ -0.73
NEDD9-203ENST00000397378 MINDY3Q9H8M7 445 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 RBM12Q9NTZ6 932 aaKnown RBP10.51□□□□□ -0.73
NEDD9-203ENST00000397378 KLK13Q9UKR3 277 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 PCDHGA5Q9Y5G8 931 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 ITPR1Q14643 2758 aa10.51□□□□□ -0.73
NEDD9-203ENST00000397378 PDCD11Q14690 1871 aaKnown RBP10.51□□□□□ -0.73
NEDD9-203ENST00000397378 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 MAST4O15021 2626 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 CYP3A7-CYP3A51PA0A087WV96 503 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PAPSS2O95340 614 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 HMGB1P09429 215 aaKnown RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 ITGA4P13612 1032 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 CYP3A7P24462 503 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 HOXA9P31269 272 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 HOXC13P31276 330 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PSMC5P62195 406 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PTGDRQ13258 359 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 KRT32Q14532 448 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PCBP1Q15365 356 aaKnown RBP eCLIP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 ADCK5Q3MIX3 580 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 Q6ZS52 159 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 SMG8Q8ND04 991 aaKnown RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 SLC7A14Q8TBB6 771 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 GAB3Q8WWW8 586 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 PSPC1Q8WXF1 523 aaKnown RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 SLC7A3Q8WY07 619 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 GJA10Q969M2 543 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 COLEC11Q9BWP8 271 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 C22orf23Q9BZE7 217 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 GPR62Q9BZJ7 368 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 DHX33Q9H6R0 707 aaKnown RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 DNMT3BQ9UBC3 853 aaKnown RBP10.5□□□□□ -0.73
NEDD9-203ENST00000397378 KCNH3Q9ULD8 1083 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 MSRB2Q9Y3D2 182 aa10.5□□□□□ -0.73
NEDD9-203ENST00000397378 TRIP11Q15643 1979 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 ARL5CA6NH57 179 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 ASAP2O43150 1006 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 CSRP1P21291 193 aaKnown RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 AXLP30530 894 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 GDI1P31150 447 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 PXNP49023 591 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 NTRK3Q16288 839 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 PLA2G4FQ68DD2 849 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 MOXD1Q6UVY6 613 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 GLIS3Q8NEA6 775 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 DEFB124Q8NES8 71 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 ETNPPLQ8TBG4 499 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 PRPF31Q8WWY3 499 aaKnown RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 CCDC51Q96ER9 411 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 GAD1Q99259 594 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 ZFP14Q9HCL3 533 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 ZNF334Q9HCZ1 680 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms