RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 SV2AQ7L0J3 742 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CYFIP1Q7L576 1253 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 NCAPG2Q86XI2 1143 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 GLYCTKQ8IVS8 523 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRN4CLQ8ND94 238 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 AENQ8WTP8 325 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 SEC14L1Q92503 715 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CAPZA3Q96KX2 299 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 RUFY1Q96T51 708 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 PNKPQ96T60 521 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 MIS12Q9H081 205 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 XPNPEP1Q9NQW7 623 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 UTP11Q9Y3A2 253 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 SCN4AP35499 1836 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TMCO5BA8MYB1 307 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 SRGAP2O75044 1071 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 FTLP02792 175 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TRIM49P0CI25 452 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TRIM49CP0CI26 452 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 CYP11B1P15538 503 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TAL1P17542 331 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 ERCC3P19447 782 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TMOD1P28289 359 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 CHRNA3P32297 505 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 EPHX2P34913 555 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 GTF2A2P52657 109 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 SGSM1Q2NKQ1 1148 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 C1orf220Q5T0J3 134 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 LIN9Q5TKA1 542 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 EMC10Q5UCC4 262 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 GADL1Q6ZQY3 521 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 PPM1KQ8N3J5 372 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 GPRC5AQ8NFJ5 357 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 LNX1Q8TBB1 728 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 CDCA5Q96FF9 252 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 UIMC1Q96RL1 719 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 CEP89Q96ST8 783 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 MMP19Q99542 508 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 PCIF1Q9H4Z3 704 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 TAF1DQ9H5J8 278 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 PRMT7Q9NVM4 692 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 MORF4L1Q9UBU8 362 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 NOCTQ9UK39 431 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-202ENST00000373720 ADGRA2Q96PE1 1338 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 SOWAHBA6NEL2 793 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 GLTPD2A6NH11 291 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 PDE2AO00408 941 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 KRIT1O00522 736 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ACKR2O00590 384 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 OGTO15294 1046 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 HSF2BPO75031 334 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ECM2O94769 699 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 SBF1O95248 1867 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 C4BPAP04003 597 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 RPLP2P05387 115 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ZBTB48P10074 688 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 P4HA1P13674 534 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 TNNI1P19237 187 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 GLRA2P23416 452 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ATICP31939 592 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 TCF7P36402 384 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 EIF3BP55884 814 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 PTENP60484 403 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 LMNB2Q03252 620 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 MCL1Q07820 350 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ARHGAP44Q17R89 818 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 MTERF2Q49AM1 385 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 SEL1L2Q5TEA6 688 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 PLA2G4FQ68DD2 849 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CCDC62Q6P9F0 684 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 MAMDC4Q6UXC1 1216 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 MAEAQ7L5Y9 396 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ANKRD23Q86SG2 305 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CBWD2Q8IUF1 395 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ARFGAP2Q8N6H7 521 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ANKRD13CQ8N6S4 541 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 RDH13Q8NBN7 331 aa9.35□□□□□ -0.91
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