RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MYO1BO43795 1136 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DOK2O60496 412 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 B4GALT4O60513 344 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PRLRP16471 622 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 TNFRSF8P28908 595 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PRPHP41219 470 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 TOB1P50616 345 aaPredicted RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 USP11P51784 963 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 ARL4CP56559 192 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 EZH2Q15910 746 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 IMMTQ16891 758 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 FAAH2Q6GMR7 532 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PM20D1Q6GTS8 502 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 TXNDC11Q6PKC3 985 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 CCDC81Q6ZN84 652 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 NCAPG2Q86XI2 1143 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.28□□□□□ -1.72
MCF2-203ENST00000370576 SEPT1Q8WYJ6 367 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DPF2Q92785 391 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DDX4Q9NQI0 724 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 TMEM160Q9NX00 188 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 NYAP2Q9P242 653 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GGA1Q9UJY5 639 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 FBXL5Q9UKA1 691 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.28□□□□□ -1.72
MCF2-203ENST00000370576 TANC1Q9C0D5 1861 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 MAGEB6P1A0A0J9YX57 407 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SEC22BO75396 215 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DGKIO75912 1065 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 TGDSO95455 350 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DHRS4L1P0CG22 281 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 ZNF24P17028 368 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PDCP20941 246 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 AKAP5P24588 427 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 NOS3P29474 1203 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 CDC25BP30305 580 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 KRT2P35908 639 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 HSD17B2P37059 387 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SSRP1Q08945 709 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 SMAD4Q13485 552 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 ANKDD1AQ495B1 522 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 UBXN11Q5T124 520 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SLC9C2Q5TAH2 1124 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 TMEM110Q86TL2 294 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 VSIG10LQ86VR7 867 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 RADILQ96JH8 1075 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PGBD1Q96JS3 809 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 DACH2Q96NX9 599 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GDF15Q99988 308 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 YIPF2Q9BWQ6 316 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SIL1Q9H173 461 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 HSD3B7Q9H2F3 369 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 MTRRQ9UBK8 725 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 LRRC72A6NJI9 287 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 CA12O43570 354 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SRGAP2O75044 1071 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 COBLO75128 1261 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 B3GALNT1O75752 331 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 MMP1P03956 469 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 ATP1A3P13637 1013 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GYG1P46976 350 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 VEGFBP49765 207 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 CCR5P51681 352 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 C1QTNF8P60827 252 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 KBTBD12Q3ZCT8 623 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 RESP18Q5W5W9 173 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 FMR1NBQ8N0W7 255 aaPredicted RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 PRR18Q8N4B5 295 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 RIPOR3Q96MK2 946 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 JAKMIP1Q96N16 626 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 WDR24Q96S15 920 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 ZSCAN10Q96SZ4 725 aaPredicted RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 ZCCHC2Q9C0B9 1178 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 ZMYND12Q9H0C1 365 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GPRC5BQ9NZH0 403 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SUCOQ9UBS9 1254 aaKnown RBP4.28□□□□□ -1.72
MCF2-203ENST00000370576 ADGRE2Q9UHX3 823 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 USP20Q9Y2K6 914 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 SMCHD1A6NHR9 2005 aa4.28□□□□□ -1.72
MCF2-203ENST00000370576 GOLGA6L22H0YM25 854 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 NFKBIEO00221 500 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 TULP2O00295 520 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 TIPRLO75663 272 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 CYP3A4P08684 503 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 GAAP10253 952 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 DESP17661 470 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 VCAM1P19320 739 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 GPC3P51654 580 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 NEK4P51957 841 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 UBE2HP62256 183 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 ABCB5Q2M3G0 1257 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 CEP55Q53EZ4 464 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 RNF152Q8N8N0 203 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
MCF2-203ENST00000370576 KLHL6Q8WZ60 621 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms