RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ADRB2P07550 413 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 PHKA2P46019 1235 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 KIF11P52732 1056 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 NKX3-2P78367 333 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 NFRKBQ6P4R8 1299 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 PLEKHO2Q8TD55 490 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 COG1Q8WTW3 980 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 MRPL4Q9BYD3 311 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 XPNPEP3Q9NQH7 507 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 FAM207AQ9NSI2 230 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 PTCH2Q9Y6C5 1203 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 A0A087WZ62 844 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 MBLAC1A4D2B0 266 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 EPHB6O15197 1021 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 HSPA6P17066 643 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 EIF4A3P38919 411 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 DLG4P78352 724 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 KCNMA1Q12791 1236 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 SNRNP35Q16560 246 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 ZPBP2Q6X784 338 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 CACNA2D4Q7Z3S7 1137 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 GPD1LQ8N335 351 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 FDXACB1Q9BRP7 624 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 LUC7LQ9NQ29 371 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 ARHGAP20Q9P2F6 1191 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 DUSP10Q9Y6W6 482 aa14.21□□□□□ -0.13
SQSTM1-201ENST00000360718 GTPBP10A4D1E9 387 aaKnown RBP14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 INO80B-WBP1J3KQ70 363 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 TREHO43280 583 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 INHAP05111 366 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 PRKCBP05771 671 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 MAGEA1P43355 309 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 VAMP7P51809 220 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 PTENP60484 403 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 APBA1Q02410 837 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 POU5F1BQ06416 359 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 CETN1Q12798 172 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 EXOC3L4Q17RC7 722 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 GBP6Q6ZN66 633 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 RRAGAQ7L523 313 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 ZNF572Q7Z3I7 529 aaPredicted RBP14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 KLHDC9Q8NEP7 349 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 SCLT1Q96NL6 688 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 INO80BQ9C086 356 aaPredicted RBP14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 HPCAL4Q9UM19 191 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 TRIM17Q9Y577 477 aa14.21□□□□□ -0.14
SQSTM1-201ENST00000360718 SSU72P8A0A1W2PR75 194 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 B4GALT5O43286 388 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 LDHAP00338 332 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TRIM49P0CI25 452 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TRIM49CP0CI26 452 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 GNAT1P11488 350 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 HOXC8P31273 242 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 PAFAH1B1P43034 410 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 CDC42EP1Q00587 391 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TMEM62Q0P6H9 643 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TMEM132AQ24JP5 1023 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 C1orf220Q5T0J3 134 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 LSM14BQ9BX40 385 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 NFKBIZQ9BYH8 718 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 FAM49AQ9H0Q0 323 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 ANKFY1Q9P2R3 1169 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 AGO2Q9UKV8 859 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 HYOU1Q9Y4L1 999 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 STYXL1Q9Y6J8 313 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 FRMPD3Q5JV73 1810 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 ZNF233A6NK53 670 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 ZNF263O14978 683 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 ZNF185O15231 689 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 PJA2O43164 708 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 EXTL3O43909 919 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 FMO5P49326 533 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 ZBTB41Q5SVQ8 909 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 CCDC181Q5TID7 509 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 CREG2Q8IUH2 290 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 RNF10Q8N5U6 811 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 FBXL18Q96ME1 805 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 MTG1Q9BT17 334 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 TCHPQ9BT92 498 aa14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 DDX20Q9UHI6 824 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-201ENST00000360718 LRRC53A6NM62 1247 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 CLDN3O15551 220 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 RNF40O75150 1001 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 PHACTR2O75167 634 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 ASGR1P07306 291 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 GPC3P51654 580 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 NLRP11P59045 1033 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 KCNA10Q16322 511 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 NLRP7Q8WX94 980 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms