RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 SNX21Q969T3 373 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 UROC1Q96N76 676 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 ACAP3Q96P50 834 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 REEP2Q9BRK0 252 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 SLC38A7Q9NVC3 462 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 CACNG4Q9UBN1 327 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
SNRPN-201ENST00000346403 TBCAO75347 108 aaKnown RBP17.3■□□□□ 0.36
SNRPN-201ENST00000346403 MARCKSP29966 332 aaPredicted RBP17.3■□□□□ 0.36
SNRPN-201ENST00000346403 OSTNP61366 133 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 MCM6Q14566 821 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 GLRA4Q5JXX5 417 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 PDXDC1Q6P996 788 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 TMC5Q6UXY8 1006 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 HAUS6Q7Z4H7 955 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 CEP120Q8N960 986 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 HASPINQ8TF76 798 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 LARP4BQ92615 738 aaKnown RBP17.3■□□□□ 0.36
SNRPN-201ENST00000346403 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 PPP1R10Q96QC0 940 aaKnown RBP17.3■□□□□ 0.36
SNRPN-201ENST00000346403 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 CXCL16Q9H2A7 254 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 POMKQ9H5K3 350 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 PARVGQ9HBI0 331 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 MAN1C1Q9NR34 630 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 FNIP2Q9P278 1114 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 ANKFY1Q9P2R3 1169 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 SRPRBQ9Y5M8 271 aaKnown RBP17.3■□□□□ 0.36
SNRPN-201ENST00000346403 C5orf42Q9H799 3197 aa17.3■□□□□ 0.36
SNRPN-201ENST00000346403 SMIM28A0A1B0GU29 152 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 CLDN3O15551 220 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 B3GAT3O94766 335 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 ABCD1P33897 745 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 DDIT3P35638 169 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 MATR3P43243 847 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 NOLC1Q14978 699 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 FAM171A1Q5VUB5 890 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 FAM173BQ6P4H8 233 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 C15orf39Q6ZRI6 1047 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 GPR149Q86SP6 731 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 CEP57Q86XR8 500 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 MYCT1Q8N699 235 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 HDAC7Q8WUI4 952 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 EDAQ92838 391 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 BICD1Q96G01 975 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 PLEKHA4Q9H4M7 779 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 STK17AQ9UEE5 414 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 FBXO2Q9UK22 296 aaPredicted RBP17.29■□□□□ 0.36
SNRPN-201ENST00000346403 HCN4Q9Y3Q4 1203 aa17.29■□□□□ 0.36
SNRPN-201ENST00000346403 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 ABLIM1O14639 778 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 SP100P23497 879 aaPredicted RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 ZNF131P52739 623 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 KANK3Q6NY19 840 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 PALB2Q86YC2 1186 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 CMASQ8NFW8 434 aaPredicted RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 LRRC15Q8TF66 581 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 PIK3R5Q8WYR1 880 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 KCNN1Q92952 543 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 DDX27Q96GQ7 796 aaKnown RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 EPSTI1Q96J88 318 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 SNX27Q96L92 541 aa17.28■□□□□ 0.36
SNRPN-201ENST00000346403 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
SNRPN-201ENST00000346403 K7ENM7 598 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 TRAK2O60296 914 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 KCNE1P15382 129 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 LIG4P49917 911 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 CLCNKBP51801 687 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 MCL1Q07820 350 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 SLC39A14Q15043 492 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 KYAT1Q16773 422 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 UPP1Q16831 310 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 SPECC1Q5M775 1068 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 RTP2Q5QGT7 225 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
SNRPN-201ENST00000346403 CCDC149Q6ZUS6 474 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 TDRD5Q8NAT2 981 aaKnown RBP17.27■□□□□ 0.36
SNRPN-201ENST00000346403 ZBTB45Q96K62 511 aaPredicted RBP17.27■□□□□ 0.36
SNRPN-201ENST00000346403 USP28Q96RU2 1077 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
SNRPN-201ENST00000346403 TBX20Q9UMR3 447 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms