RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PLEKHO2Q8TD55 490 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 OSBPL9Q96SU4 736 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 SBF1O95248 1867 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 FOXN3O00409 490 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 RPS6KA5O75582 802 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 TNFAIP3P21580 790 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 GJC1P36383 396 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 KCNV1Q6PIU1 500 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 INTS8Q75QN2 995 aaKnown RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 ADAT2Q7Z6V5 191 aaKnown RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 SPATA4Q8NEY3 305 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 BAP1Q92560 729 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 TATDN2Q93075 761 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 CEP72Q9P209 647 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 HES2Q9Y543 173 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 IGSF9BQ9UPX0 1349 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 CYP26A1O43174 497 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 SND1Q7KZF4 910 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■■□ 23.1
COL18A1-201ENST00000342220 MMGT1Q8N4V1 131 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 AENQ8WTP8 325 aaKnown RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 N4BP2L2Q92802 583 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 AP5M1Q9H0R1 490 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 FLRT1Q9NZU1 646 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 MAFBQ9Y5Q3 323 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-201ENST00000342220 ATAD5Q96QE3 1844 aa14.04□□□□□ -0.16
COL18A1-201ENST00000342220 EVI5O60447 810 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 TLR2O60603 784 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 GUCY2FP51841 1108 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 GLRA4Q5JXX5 417 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 ANKRD23Q86SG2 305 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-201ENST00000342220 ATMINO43313 823 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-201ENST00000342220 LCA5LO95447 670 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 TRIM32Q13049 653 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 CXCL17Q6UXB2 119 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 VPS36Q86VN1 386 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 GPD1LQ8N335 351 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 SAMD3Q8N6K7 520 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 IQCDQ96DY2 449 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 OSMRQ99650 979 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 TMEM117Q9H0C3 514 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 NFASCO94856 1347 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 GOLGA6BA6NDN3 693 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 ADCY6O43306 1168 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 MAPTP10636 758 aaKnown RBP14.03□□□□□ -0.16
COL18A1-201ENST00000342220 MAPK4P31152 587 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 GTF2BQ00403 316 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 EEF1DP3Q658K8 133 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 TLK2Q86UE8 772 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 SLC30A5Q8TAD4 765 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 ALS2CR12Q96Q35 445 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 RABEP2Q9H5N1 569 aa14.03□□□□□ -0.16
COL18A1-201ENST00000342220 STRNO43815 780 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 TMOD1P28289 359 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 ELF1P32519 619 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 RDXP35241 583 aaKnown RBP14.02□□□□□ -0.16
COL18A1-201ENST00000342220 FLT3LGP49771 235 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 PHLDB3Q6NSJ2 640 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 SV2AQ7L0J3 742 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 SLC20A1Q8WUM9 679 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 PHIPQ8WWQ0 1821 aa14.02□□□□□ -0.16
COL18A1-201ENST00000342220 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.16
COL18A1-201ENST00000342220 DICER1Q9UPY3 1922 aaKnown RBP14.02□□□□□ -0.17
COL18A1-201ENST00000342220 EDN1P05305 212 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-201ENST00000342220 WNT7BP56706 349 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 TRPC3Q13507 836 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 ALKBH5Q6P6C2 394 aaKnown RBP14.02□□□□□ -0.17
COL18A1-201ENST00000342220 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 ABHD16BQ9H3Z7 469 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-201ENST00000342220 ARHGAP1Q07960 439 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 HGSNATQ68CP4 663 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 TAS1R3Q7RTX0 852 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 ZNF571Q7Z3V5 609 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-201ENST00000342220 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 SEMA4DQ92854 862 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 MS4A14Q96JA4 679 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 NOD1Q9Y239 953 aa14.02□□□□□ -0.17
COL18A1-201ENST00000342220 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 MANSC4A6NHS7 340 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-201ENST00000342220 LYPLA2O95372 231 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 TMEM191BP0C7N4 346 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms