RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CHST12Q9NRB3 414 aa8.49□□□□□ -1.05
TMC1-202ENST00000340019 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
TMC1-202ENST00000340019 GCNT4Q9P109 453 aa8.49□□□□□ -1.05
TMC1-202ENST00000340019 CAPN11Q9UMQ6 739 aa8.49□□□□□ -1.05
TMC1-202ENST00000340019 TANC1Q9C0D5 1861 aa8.49□□□□□ -1.05
TMC1-202ENST00000340019 GPR182O15218 404 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 MFAP3LO75121 409 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 NPTXRO95502 500 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 CXCL8P10145 99 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 CAPN2P17655 700 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TRIM21P19474 475 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 OSTNP61366 133 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 GOLGA8FQ08AF8 430 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 GOLGA8DPQ0D2H9 430 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 SURF1Q15526 300 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 SLC10A6Q3KNW5 377 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TRIM65Q6PJ69 517 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 APBB1IPQ7Z5R6 666 aaPredicted RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 WDR49Q8IV35 697 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 CCDC150Q8NCX0 1101 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TOX2Q96NM4 488 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 FNBP1Q96RU3 617 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 GANQ9H2C0 597 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 RPF1Q9H9Y2 349 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 PADI3Q9ULW8 664 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 AKR1B15C9JRZ8 316 aaPredicted RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 GHRP10912 638 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 ADKP55263 362 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 APBA1Q02410 837 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 ZACNQ401N2 412 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 PKNOX2Q96KN3 472 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 LSM14BQ9BX40 385 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 EDEM3Q9BZQ6 932 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 IL18RAPO95256 599 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 ACTN1P12814 892 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TNNI1P19237 187 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 CD52P31358 61 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 NFX1Q12986 1120 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 PAK2Q13177 524 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 KLHDC7AQ5VTJ3 777 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TDRD10Q5VZ19 366 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 LMBRD2Q68DH5 695 aaPredicted RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 EHBP1Q8NDI1 1231 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 NEK11Q8NG66 645 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 CPLX3Q8WVH0 158 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 BAP1Q92560 729 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 FAM84AQ96KN4 292 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 ACAP3Q96P50 834 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 MCOLN1Q9GZU1 580 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 NXF3Q9H4D5 531 aaKnown RBP8.48□□□□□ -1.05
TMC1-202ENST00000340019 ASB7Q9H672 318 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
TMC1-202ENST00000340019 LACTBL1A8MY62 500 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 LRRN2O75325 713 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 SELPP16109 830 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 AP3M2P53677 418 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 CETN1Q12798 172 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 LRMPQ12912 555 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 BFSP2Q13515 415 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 DSC3Q14574 896 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 GPNMBQ14956 572 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 TRIM60Q495X7 471 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 ALKAL1Q6UXT8 129 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 LRRC8DQ7L1W4 858 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 SMG8Q8ND04 991 aaKnown RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 TAS1R2Q8TE23 839 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 SEMA4DQ92854 862 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 ZNF830Q96NB3 372 aaPredicted RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 PANX2Q96RD6 677 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 DNAJC7Q99615 494 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 NAA15Q9BXJ9 866 aaKnown RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 INTS2Q9H0H0 1204 aaKnown RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 PLEKHA5Q9HAU0 1116 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 ABHD10Q9NUJ1 306 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 CEP72Q9P209 647 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 HES2Q9Y543 173 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 IPPQ9Y573 584 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 VNN1O95497 513 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 UCHL3P15374 230 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 FECHP22830 423 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 KRT9P35527 623 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 ZBED6P86452 979 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 CCZ1BP86790 482 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 CCZ1P86791 482 aaPredicted RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 TMEM139Q8IV31 216 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 FBXL13Q8NEE6 735 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 TRIM44Q96DX7 344 aaPredicted RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 PAWRQ96IZ0 340 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms