RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 UBN1Q9NPG3 1134 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 PCDH10Q9P2E7 1040 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 TTC3P53804 2025 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 AKAP5P24588 427 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 HSP90AA4PQ58FG1 418 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 XKR4Q5GH76 650 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 ALKAL1Q6UXT8 129 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 NPAS4Q8IUM7 802 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 CRIPAKQ8N1N5 446 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 PLEKHO2Q8TD55 490 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 PARD3BQ8TEW8 1205 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 TSPAN18Q96SJ8 248 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 PARP2Q9UGN5 583 aa19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 LIMA1Q9UHB6 759 aaKnown RBP19.42■□□□□ 0.7
SDCBP2-201ENST00000339987 CITO14578 2027 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 LACTBL1A8MY62 500 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 INPPL1O15357 1258 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 MTIF2P46199 727 aaKnown RBP19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 VAMP7P51809 220 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 WDR5P61964 334 aaKnown RBP19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 CLDN10P78369 228 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 PPP2R3AQ06190 1150 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 RNF169Q8NCN4 708 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 ANKRD20A12PQ8NF67 263 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 LPPQ93052 612 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 RSAD1Q9HA92 442 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 PDE11AQ9HCR9 933 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 CNTN3Q9P232 1028 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 PCDHB7Q9Y5E2 793 aa19.41■□□□□ 0.7
SDCBP2-201ENST00000339987 ANK1P16157 1881 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 PDE4DIPQ5VU43 2346 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 LRRC10BA6NIK2 292 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 MEIS3P2A8K0S8 358 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 AMHP03971 560 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 ATP1A3P13637 1013 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 WNT7BP56706 349 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 UVSSAQ2YD98 709 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 RSPH1Q8WYR4 309 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 HERVK_113Q902F9 699 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 SLC35C1Q96A29 364 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 CCDC127Q96BQ5 260 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 FNBP1Q96RU3 617 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 CGRRF1Q99675 332 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 LRFN2Q9ULH4 789 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 DERAQ9Y315 318 aa19.4■□□□□ 0.7
SDCBP2-201ENST00000339987 HOXA2O43364 376 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 KCNE1P15382 129 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 MAGEA10P43363 369 aaPredicted RBP19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 KRT31Q15323 416 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 MAN2A1Q16706 1144 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 C1orf220Q5T0J3 134 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 OTOP2Q7RTS6 562 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 APTXQ7Z2E3 356 aaKnown RBP19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 WDR49Q8IV35 697 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 TUBGCP2Q9BSJ2 902 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 RNF19AQ9NV58 838 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 C2CD2Q9Y426 696 aa19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.39■□□□□ 0.69
SDCBP2-201ENST00000339987 LRRIQ3A6PVS8 624 aaPredicted RBP19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 STX10O60499 249 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 GTF2H1P32780 548 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 KCNJ6P48051 423 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 DLG4P78352 724 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 DCAF17Q5H9S7 520 aaPredicted RBP19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 GLB1LQ6UWU2 654 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 CREBRFQ8IUR6 639 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 TOP1MTQ969P6 601 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 FAM212AQ96EL1 285 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 GAD1Q99259 594 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 MTIF3Q9H2K0 278 aaKnown RBP19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 KLK14Q9P0G3 267 aa19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 MKI67P46013 3256 aaKnown RBP19.38■□□□□ 0.69
SDCBP2-201ENST00000339987 ARL5CA6NH57 179 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 PTGESO14684 152 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 OFD1O75665 1012 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 TRIM49P0CI25 452 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 TRIM49CP0CI26 452 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 DLATP10515 647 aaKnown RBP19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 IBSPP21815 317 aaPredicted RBP19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 MLH1P40692 756 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 COPB1P53618 953 aaKnown RBP19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 AP3M2P53677 418 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 DEFB103AP81534 67 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 CLLU1OSQ5K130 101 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 TCERG1LQ5VWI1 586 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 EFCAB13Q8IY85 973 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 GSTCDQ8NEC7 633 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 RPS6KC1Q96S38 1066 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 TAB2Q9NYJ8 693 aa19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
SDCBP2-201ENST00000339987 PTPRJQ12913 1337 aa19.36■□□□□ 0.69
SDCBP2-201ENST00000339987 SMIM28A0A1B0GU29 152 aa19.36■□□□□ 0.69
SDCBP2-201ENST00000339987 FSD2A1L4K1 749 aa19.36■□□□□ 0.69
SDCBP2-201ENST00000339987 TPM2P07951 284 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms