RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 MAKP20794 623 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CNGA1P29973 690 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 ID4P47928 161 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PITRM1Q5JRX3 1037 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 IQSEC1Q6DN90 963 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 HTR3DQ70Z44 454 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 ZFPM1Q8IX07 1006 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 GLB1L3Q8NCI6 653 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PDCD2LQ9BRP1 358 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PCED1AQ9H1Q7 454 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 TOPORSQ9NS56 1045 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 TMPRSS11EQ9UL52 423 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 HDAC5Q9UQL6 1122 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 REXO2Q9Y3B8 237 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PRKAB1Q9Y478 270 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PLSCR1O15162 318 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 NARSO43776 548 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 STC2O76061 302 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 LPLP06858 475 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 ENPP1P22413 925 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CASRP41180 1078 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MASP1P48740 699 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 GZMKP49863 264 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 HMGA2P52926 109 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 RABGGTBP53611 331 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 LGALS4P56470 323 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 FAPQ12884 760 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 TRIM25Q14258 630 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CT83Q5H943 113 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 AFAP1L2Q8N4X5 818 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MNTQ99583 582 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CPPED1Q9BRF8 314 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 ENKD1Q9H0I2 346 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 SPON1Q9HCB6 807 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CLCA2Q9UQC9 943 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 NRXN1Q9ULB1 1477 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 KLRG2A4D1S0 409 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 HOXA3O43365 443 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MTHFD2P13995 350 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MRPL49Q13405 166 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 FHL2Q14192 279 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PDCD1Q15116 288 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 UBE3CQ15386 1083 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 FAM214AQ32MH5 1076 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 METTL24Q5JXM2 366 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 GJC2Q5T442 439 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 NAIF1Q69YI7 327 aaPredicted RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 STRA8Q7Z7C7 330 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 FAM83AQ86UY5 434 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 LYSMD2Q8IV50 215 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 SLC41A1Q8IVJ1 513 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MSL3Q8N5Y2 521 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 ZNF480Q8WV37 535 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PGBD4Q96DM1 585 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 CDC5LQ99459 802 aaKnown RBP2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 MRIQ9BWK5 157 aa2.23□□□□□ -2.05
CCDC144A-201ENST00000328495 PTCH1Q13635 1447 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 COL4A4P53420 1690 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 DNAJC6O75061 913 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 RECQL4O94761 1208 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 SLPIP03973 132 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 HSP90B1P14625 803 aaKnown RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 HK1P19367 917 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PTGS2P35354 604 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 TMPRSS15P98073 1019 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 KLF10Q13118 480 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 TOB2Q14106 344 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 STAT4Q14765 748 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 C19orf54Q5BKX5 351 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 RABL3Q5HYI8 236 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PDZD4Q76G19 769 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 DOK3Q7L591 496 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 KRT26Q7Z3Y9 468 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 SNX33Q8WV41 574 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 EAF2Q96CJ1 260 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 FAM193BQ96PV7 902 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 POLA1P09884 1462 aaPredicted RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 SLIT3O75094 1523 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 FBN3Q75N90 2809 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PRR5-ARHGAP8B1AHC4 643 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 TRIM24O15164 1050 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PHF2O75151 1096 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 TMEM127O75204 238 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PPFIA4O75335 1185 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 GASTP01350 101 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 VIL1P09327 827 aaKnown RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 LBX1P52954 281 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 MRPS9P82933 396 aaKnown RBP2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 APBA1Q02410 837 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 C1QL3Q5VWW1 255 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 FAM180AQ6UWF9 173 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 SYNE4Q8N205 404 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 AMER2Q8N7J2 671 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 AUTS2Q8WXX7 1259 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 DPP7Q9UHL4 492 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 XDHP47989 1333 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 ATP7AQ04656 1500 aa2.22□□□□□ -2.05
CCDC144A-201ENST00000328495 PKD1L3Q7Z443 1732 aa2.21□□□□□ -2.05
CCDC144A-201ENST00000328495 GOLGA8AA7E2F4 631 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms