RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 PPCSQ9HAB8 311 aa20.48■□□□□ 0.87
TRA2A-201ENST00000297071 LARSQ9P2J5 1176 aaKnown RBP20.48■□□□□ 0.87
TRA2A-201ENST00000297071 SMCHD1A6NHR9 2005 aa20.48■□□□□ 0.87
TRA2A-201ENST00000297071 GAS7O60861 476 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 SGPL1O95470 568 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 NDUFB10O96000 172 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 RPSAP08865 295 aaKnown RBP20.47■□□□□ 0.87
TRA2A-201ENST00000297071 YY1P25490 414 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 STX2P32856 288 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 IL9RQ01113 521 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 CCDC38Q502W7 563 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 CCDC25Q86WR0 208 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 TDRPQ86YL5 185 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 ATL2Q8NHH9 583 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 UHMK1Q8TAS1 419 aaKnown RBP20.47■□□□□ 0.87
TRA2A-201ENST00000297071 ZNF653Q96CK0 615 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 RIT2Q99578 217 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 NINJ2Q9NZG7 142 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 NEU2Q9Y3R4 380 aa20.47■□□□□ 0.87
TRA2A-201ENST00000297071 ARHGEF35A5YM69 484 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ABLIM1O14639 778 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 PPP1R12AO14974 1030 aaPredicted RBP20.46■□□□□ 0.87
TRA2A-201ENST00000297071 HIP1RO75146 1068 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 KCNJ1P48048 391 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 YARSP54577 528 aaKnown RBP20.46■□□□□ 0.87
TRA2A-201ENST00000297071 DAW1Q8N136 415 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 KIFAP3Q92845 792 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 TRIM11Q96F44 468 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 DCLK3Q9C098 648 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 LRMDAQ9H2I8 198 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ADAM22Q9P0K1 906 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ASIC3Q9UHC3 531 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 CORO1CQ9ULV4 474 aaPredicted RBP20.46■□□□□ 0.87
TRA2A-201ENST00000297071 L3MBTL1Q9Y468 752 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ANKRD31Q8N7Z5 1873 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 MYBL1P10243 752 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ATP2A2P16615 1042 aaKnown RBP20.46■□□□□ 0.87
TRA2A-201ENST00000297071 TAC1P20366 129 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 CALRP27797 417 aaKnown RBP20.46■□□□□ 0.87
TRA2A-201ENST00000297071 MXI1P50539 228 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 RASA2Q15283 850 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 CGB2Q6NT52 195 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 ZNF570Q96NI8 536 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 TEKT3Q9BXF9 490 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 KCNK9Q9NPC2 374 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 SENP1Q9P0U3 644 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
TRA2A-201ENST00000297071 PRPF4O43172 522 aaKnown RBP eCLIP20.45■□□□□ 0.863e-7■□□□□ 9.3
TRA2A-201ENST00000297071 THAP12O43422 761 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 ACSL3O95573 720 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 ATF2P15336 505 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 GPC3P51654 580 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 ITGA8P53708 1063 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 GTF2BQ00403 316 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 GRIK3Q13003 919 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 BLMHQ13867 455 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 LRRC14Q15048 493 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 VPS72Q15906 364 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 USH1GQ495M9 461 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 ENOSF1Q7L5Y1 443 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 KSR1Q8IVT5 923 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 THOC1Q96FV9 657 aaKnown RBP20.45■□□□□ 0.86
TRA2A-201ENST00000297071 KREMEN1Q96MU8 473 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 DEFB129Q9H1M3 183 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 ANAPC5Q9UJX4 755 aa20.45■□□□□ 0.86
TRA2A-201ENST00000297071 K7ENM7 598 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 NDC80O14777 642 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 SERPINB2P05120 415 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 GTF2H1P32780 548 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 CHKAP35790 457 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 DLG4P78352 724 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 MPP2Q14168 576 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 CEP55Q53EZ4 464 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 CCDC89Q8N998 374 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 TMEM117Q9H0C3 514 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRA2A-201ENST00000297071 USH1CQ9Y6N9 552 aa20.44■□□□□ 0.86
TRA2A-201ENST00000297071 CLDN3O15551 220 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 HNRNPCL1O60812 293 aaKnown RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 DIAPH2O60879 1101 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 SMNDC1O75940 238 aaKnown RBP eCLIP20.43■□□□□ 0.865e-9■□□□□ 8.5
TRA2A-201ENST00000297071 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 CYP11B1P15538 503 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 POLGP54098 1239 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 NFIAQ12857 509 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 CCNG2Q16589 344 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 KCTD19Q17RG1 926 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 DDX1Q92499 740 aaKnown RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 MAML1Q92585 1016 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 UNC45AQ9H3U1 944 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 NAALADL1Q9UQQ1 740 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 LRRC42Q9Y546 428 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 FAM47DPA6NHR8 397 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 TRAFD1O14545 582 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 LYPLA2O95372 231 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 POLR2MP0CAP2 368 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 CREB1P16220 341 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 CRKP46108 304 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 MGAT5Q09328 741 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms