RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RARBP10826 455 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 FMNL3Q8IVF7 1028 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 KAT5Q92993 513 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 CPB2Q96IY4 423 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 NT5C1BQ96P26 610 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 HDAC6Q9UBN7 1215 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 SRRDQ9UH36 339 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 ADAMTS1Q9UHI8 967 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 ANK1P16157 1881 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 A0A087X0T9 212 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 TREHO43280 583 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 GPR32O75388 356 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 FAM228BP0C875 321 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 ARF4P18085 180 aaPredicted RBP24.69■■□□□ 1.54
PTX3-201ENST00000295927 YY1P25490 414 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 MAGEA1P43355 309 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 ZNF200P98182 395 aaPredicted RBP24.69■■□□□ 1.54
PTX3-201ENST00000295927 CDC42EP1Q00587 391 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 PPM1KQ8N3J5 372 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 CEP120Q8N960 986 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 KREMEN1Q96MU8 473 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 PDZD7Q9H5P4 517 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 SPC25Q9HBM1 224 aa24.69■■□□□ 1.54
PTX3-201ENST00000295927 C17orf102A2RUQ5 167 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 GPR25O00155 361 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 KRT86O43790 486 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 CCND3P30281 292 aaPredicted RBP24.68■■□□□ 1.54
PTX3-201ENST00000295927 CASQ1P31415 396 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 BIRC3Q13489 604 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 ZNF569Q5MCW4 686 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 C7orf31Q8N865 590 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 OR5B17Q8NGF7 314 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 HELQQ8TDG4 1101 aa24.68■■□□□ 1.54
PTX3-201ENST00000295927 MTG1Q9BT17 334 aaPredicted RBP24.68■■□□□ 1.54
PTX3-201ENST00000295927 RIOK3O14730 519 aaKnown RBP24.67■■□□□ 1.54
PTX3-201ENST00000295927 TSPAN1O60635 241 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 VNN1O95497 513 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 HLA-DRAP01903 254 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 PRKAR2AP13861 404 aaKnown RBP24.67■■□□□ 1.54
PTX3-201ENST00000295927 HOXD10P28358 340 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 OSTNP61366 133 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 KIF5AQ12840 1032 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 DNAJB3Q8WWF6 145 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 ELMO3Q96BJ8 720 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 FAM212AQ96EL1 285 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 PI4K2AQ9BTU6 479 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 GINS2Q9Y248 185 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 SCN10AQ9Y5Y9 1956 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 PCNTO95613 3336 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 ZC3H11AO75152 810 aaKnown RBP eCLIP24.67■■□□□ 1.54
PTX3-201ENST00000295927 ERLIN2O94905 339 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 CCDC172P0C7W6 258 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 MCF2P10911 925 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 HOXC8P31273 242 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 PIK3CAP42336 1068 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 MFAP3P55082 362 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 NKX3-2P78367 333 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 WDR49Q8IV35 697 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 TATDN2Q93075 761 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 GCOM2Q9BZD3 368 aaPredicted RBP24.67■■□□□ 1.54
PTX3-201ENST00000295927 CDHR5Q9HBB8 845 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 MYO1AQ9UBC5 1043 aa24.67■■□□□ 1.54
PTX3-201ENST00000295927 GNAT1P11488 350 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 FGFR4P22455 802 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 ANXA13P27216 316 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 HTRA3P83110 453 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 SURF1Q15526 300 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 CXCL17Q6UXB2 119 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 TSGA10Q9BZW7 698 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 DUSP10Q9Y6W6 482 aa24.66■■□□□ 1.54
PTX3-201ENST00000295927 ADAMTS4O75173 837 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 AP3M2P53677 418 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 TERF1P54274 439 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 TMEM192Q8IY95 271 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 SLC35F6Q8N357 371 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 XPNPEP3Q9NQH7 507 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 OSMRQ99650 979 aa24.65■■□□□ 1.54
PTX3-201ENST00000295927 PJA2O43164 708 aa24.64■■□□□ 1.53
PTX3-201ENST00000295927 WDR44Q5JSH3 913 aa24.64■■□□□ 1.53
PTX3-201ENST00000295927 VPS36Q86VN1 386 aa24.64■■□□□ 1.53
PTX3-201ENST00000295927 SHC3Q92529 594 aa24.64■■□□□ 1.53
PTX3-201ENST00000295927 RPF1Q9H9Y2 349 aaKnown RBP24.64■■□□□ 1.53
PTX3-201ENST00000295927 LUC7LQ9NQ29 371 aaKnown RBP24.64■■□□□ 1.53
PTX3-201ENST00000295927 A0A1B0GUA9 196 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 PHACTR2O75167 634 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 STAG3L1P0CL83 205 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 BMS1Q14692 1282 aaKnown RBP24.63■■□□□ 1.53
PTX3-201ENST00000295927 FAM71AQ8IYT1 594 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 TXLNBQ8N3L3 684 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 MYRIPQ8NFW9 859 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 OLIG1Q8TAK6 271 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 SYT11Q9BT88 431 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 C1orf112Q9NSG2 853 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 NAGPAQ9UK23 515 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 DDX3XO00571 662 aaKnown RBP eCLIP24.63■■□□□ 1.53
PTX3-201ENST00000295927 HMGCRP04035 888 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 CLTAP09496 248 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 CXCL8P10145 99 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 DARSP14868 501 aaKnown RBP24.63■■□□□ 1.53
PTX3-201ENST00000295927 USP8P40818 1118 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms