RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 BIRC3Q13489 604 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 DSC3Q14574 896 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 LPIN1Q14693 890 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 MICAL1Q8TDZ2 1067 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TAF4BQ92750 862 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 NOC4LQ9BVI4 516 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TRPV6Q9H1D0 765 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CDT1Q9H211 546 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TMCO5BA8MYB1 307 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CLIC2O15247 247 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TRIM14Q14142 442 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 C1orf112Q9NSG2 853 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TBX21Q9UL17 535 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 NOC2LQ9Y3T9 749 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 KIAA0355O15063 1070 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 AFPP02771 609 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CLTBP09497 229 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CYP2J2P51589 502 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 FAAP100Q0VG06 881 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF618Q5T7W0 954 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 TMEM40Q8WWA1 233 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ERGIC2Q96RQ1 377 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 UBN1Q9NPG3 1134 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 IMPACTQ9P2X3 320 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 PFKMP08237 780 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ATP1A3P13637 1013 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 UBASH3AP57075 661 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM193AP78312 1265 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 CRELD2Q6UXH1 353 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 MRPL10Q7Z7H8 261 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBTB33Q86T24 672 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 VPS36Q86VN1 386 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 WDR49Q8IV35 697 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 HACE1Q8IYU2 909 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 OTUD6BQ8N6M0 293 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 PDLIM2Q96JY6 352 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 CGRRF1Q99675 332 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 B4GALT5O43286 388 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 VAMP7P51809 220 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 CCDC112Q8NEF3 446 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 SLC35C1Q96A29 364 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FAXDC2Q96IV6 333 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ASB7Q9H672 318 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 MYO6Q9UM54 1294 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 KNL1Q8NG31 2342 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 IFRD2Q12894 506 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 UBXN11Q5T124 520 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 VSTM4Q8IW00 320 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 TMX1Q9H3N1 280 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 RGS18Q9NS28 235 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FBXL5Q9UKA1 691 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 PABPN1LA6NDY0 278 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 XKR4Q5GH76 650 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FIGNQ5HY92 759 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 DIS3LQ8TF46 1054 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM81BQ96LP2 452 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM124BQ9H5Z6 455 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 CNTN3Q9P232 1028 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ST3GAL5Q9UNP4 418 aa9.12□□□□□ -0.95
PTPDC1-201ENST00000288976 ASXL3Q9C0F0 2248 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 A0A1W2PQJ5 194 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 TISP43B9A030 160 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 AP5Z1O43299 807 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 CASP4P49662 377 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ALKAL1Q6UXT8 129 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 HOOK3Q86VS8 718 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 SNX27Q96L92 541 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 NUP58Q9BVL2 599 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ELAC1Q9H777 363 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 TMEM8AQ9HCN3 771 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 RBAKQ9NYW8 714 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 IFNKQ9P0W0 207 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 PIN4Q9Y237 131 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 CEP83Q9Y592 693 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ADCY5O95622 1261 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 PLEKHG4Q58EX7 1191 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 CPB2Q96IY4 423 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 PPP1R9BQ96SB3 815 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM213AQ9BRX8 229 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 XPO4Q9C0E2 1151 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 RPF1Q9H9Y2 349 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 C2CD2Q9Y426 696 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF623O75123 536 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ZC3H11AO75152 810 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 ZSCAN20P17040 1043 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 CYP3A5P20815 502 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 TERF1P54274 439 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms