RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 SNCAIPQ9Y6H5 919 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 SBF1O95248 1867 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TULP2O00295 520 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 EIF3HO15372 352 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ZEB2O60315 1214 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 PPFIA2O75334 1257 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 USP2O75604 605 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 C4BPAP04003 597 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 UNGP13051 313 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 GLRA2P23416 452 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 GBP1P32455 592 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 PTGIRP43119 386 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 MARCKSL1P49006 195 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 LIG4P49917 911 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ALDH5A1P51649 535 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TARBP2Q15633 366 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 SLFN12LQ6IEE8 588 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 CRELD2Q6UXH1 353 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 C12orf50Q8NA57 414 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TATDN2Q93075 761 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 BICD1Q96G01 975 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TMBIM4Q9HC24 238 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ACP6Q9NPH0 428 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 C1orf112Q9NSG2 853 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 PPME1Q9Y570 386 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 POLR2AP24928 1970 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 MYBL1P10243 752 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 DLATP10515 647 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 UBA1P22314 1058 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 STRN3Q13033 797 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 TDRD10Q5VZ19 366 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 CYFIP1Q7L576 1253 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 PRELID2Q8N945 189 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ASAP3Q8TDY4 903 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ZNF653Q96CK0 615 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 TRIM11Q96F44 468 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 RUNDC3BQ96NL0 473 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 HAPLN2Q9GZV7 340 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 TMEM134Q9H6X4 195 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 AGO2Q9UKV8 859 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 CNTN6Q9UQ52 1028 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 PCDHB2Q9Y5E7 798 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 A0A0B4J269 797 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 SRRM3A6NNA2 597 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 FARP2O94887 1054 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 LDHAP00338 332 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 CYP1A1P04798 512 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 FLT3P36888 993 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 NLRP11P59045 1033 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 BPIFB4P59827 614 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 CNTN2Q02246 1040 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ZNF844Q08AG5 666 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 VGLL4Q14135 290 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 MESDQ14696 234 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 SEL1L2Q5TEA6 688 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 ZDHHC14Q8IZN3 488 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 SLCO2A1Q92959 643 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 PCYT2Q99447 389 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 FMO2Q99518 471 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 TRIM51Q9BSJ1 452 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 FAM129AQ9BZQ8 928 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 RASAL2Q9UJF2 1139 aa7.77□□□□□ -1.17
SPARCL1-201ENST00000282470 PTPRJQ12913 1337 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 GSTTP1A0A1W2PQM5 241 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 PODXLO00592 558 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 VNN1O95497 513 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 TGFB3P10600 412 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 PYGMP11217 842 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 ACO1P21399 889 aaKnown RBP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 WNT7BP56706 349 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 SP4Q02446 784 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 CENPCQ03188 943 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 BIRC3Q13489 604 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 SIX1Q15475 284 aaPredicted RBP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 TREML2Q5T2D2 321 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 NAA35Q5VZE5 725 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 ANKRD35Q8N283 1001 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 SH2D3CQ8N5H7 860 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 PROCA1Q8NCQ7 364 aaPredicted RBP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 SLC7A3Q8WY07 619 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 PPP1R1BQ9UD71 204 aaPredicted RBP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 CNTNAP2Q9UHC6 1331 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 HLA-DRAP01903 254 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 MYZAPP0CAP1 466 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 KRT5P13647 590 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 NR1D1P20393 614 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 FNTAP49354 379 aa7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 EIF3BP55884 814 aaKnown RBP7.76□□□□□ -1.17
SPARCL1-201ENST00000282470 RWDD2BP57060 319 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms