RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PARP2Q9UGN5 583 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 ARMCX3Q9UH62 379 aaPredicted RBP18.69■□□□□ 0.58
SKP2-201ENST00000274254 RALGAPA2Q2PPJ7 1873 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 GOLGA6L19H0YKK7 550 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 EEF1GP26641 437 aaKnown RBP18.69■□□□□ 0.58
SKP2-201ENST00000274254 BFSP1Q12934 665 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 TCP11X2Q5H9J9 407 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 NPAS4Q8IUM7 802 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 TRIM59Q8IWR1 403 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 TMC2Q8TDI7 906 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 PARD3BQ8TEW8 1205 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 ASB7Q9H672 318 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 RSAD1Q9HA92 442 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 UBN1Q9NPG3 1134 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 RNF19AQ9NV58 838 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 CNTN3Q9P232 1028 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 PCDHB7Q9Y5E2 793 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 LACTBL1A8MY62 500 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 INPPL1O15357 1258 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 IL18RAPO95256 599 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 VAMP7P51809 220 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 CLDN10P78369 228 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 DEFB103AP81534 67 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 PPP2R3AQ06190 1150 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 CD302Q8IX05 232 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 RNF169Q8NCN4 708 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 GSTCDQ8NEC7 633 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 TOP1MTQ969P6 601 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 CXCL16Q9H2A7 254 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
SKP2-201ENST00000274254 MAGEC2Q9UBF1 373 aaPredicted RBP18.68■□□□□ 0.58
SKP2-201ENST00000274254 ARL5CA6NH57 179 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 H0YGN5 161 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 AMHP03971 560 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 ATP1A3P13637 1013 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 KRT13P13646 458 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 IBSPP21815 317 aaPredicted RBP18.67■□□□□ 0.58
SKP2-201ENST00000274254 MLH1P40692 756 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 DLG4P78352 724 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 SPAG1Q07617 926 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 SURF1Q15526 300 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 CLLU1OSQ5K130 101 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 C1orf220Q5T0J3 134 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 RASIP1Q5U651 963 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 CCDC127Q96BQ5 260 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 ZFP42Q96MM3 310 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 GAD1Q99259 594 aa18.67■□□□□ 0.58
SKP2-201ENST00000274254 CXXC1Q9P0U4 656 aaPredicted RBP18.67■□□□□ 0.58
SKP2-201ENST00000274254 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 LRRC10BA6NIK2 292 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 PTGESO14684 152 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 OFD1O75665 1012 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 CAPN15O75808 1086 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 FGFR1P11362 822 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 KCNE1P15382 129 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 AFF1P51825 1210 aaKnown RBP18.66■□□□□ 0.58
SKP2-201ENST00000274254 TPM4P67936 248 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 APTXQ7Z2E3 356 aaKnown RBP18.66■□□□□ 0.58
SKP2-201ENST00000274254 USP37Q86T82 979 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 SLC35C1Q96A29 364 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 ZMAT2Q96NC0 199 aaKnown RBP18.66■□□□□ 0.58
SKP2-201ENST00000274254 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 TSPAN18Q96SJ8 248 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 GDF15Q99988 308 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 LIMA1Q9UHB6 759 aaKnown RBP18.66■□□□□ 0.58
SKP2-201ENST00000274254 LRFN2Q9ULH4 789 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 C2CD2Q9Y426 696 aa18.66■□□□□ 0.58
SKP2-201ENST00000274254 PDCD11Q14690 1871 aaKnown RBP18.66■□□□□ 0.58
SKP2-201ENST00000274254 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
SKP2-201ENST00000274254 HOXA2O43364 376 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
SKP2-201ENST00000274254 MTIF2P46199 727 aaKnown RBP18.65■□□□□ 0.58
SKP2-201ENST00000274254 KCNJ6P48051 423 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 KRT31Q15323 416 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 ZBTB6Q15916 424 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 WDR49Q8IV35 697 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 RSPH1Q8WYR4 309 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 POP1Q99575 1024 aaKnown RBP18.65■□□□□ 0.58
SKP2-201ENST00000274254 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 TUBGCP2Q9BSJ2 902 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 DERAQ9Y315 318 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
SKP2-201ENST00000274254 PTPRJQ12913 1337 aa18.65■□□□□ 0.58
SKP2-201ENST00000274254 SMIM28A0A1B0GU29 152 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 ZBBXA8MT70 800 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 NFICP08651 508 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 TRIM49P0CI25 452 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 TRIM49CP0CI26 452 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 CDK11BP21127 795 aaKnown RBP18.64■□□□□ 0.58
SKP2-201ENST00000274254 MAN2A1Q16706 1144 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 DCAF17Q5H9S7 520 aaPredicted RBP18.64■□□□□ 0.58
SKP2-201ENST00000274254 JADE1Q6IE81 842 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms