RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
LSG1-201ENST00000265245 C1orf112Q9NSG2 853 aa11.06□□□□□ -0.64
LSG1-201ENST00000265245 SLC9A2Q9UBY0 812 aa11.06□□□□□ -0.64
LSG1-201ENST00000265245 SNX24Q9Y343 169 aa11.06□□□□□ -0.64
LSG1-201ENST00000265245 PEX5P50542 639 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 TGFB2P61812 414 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 PRKCEQ02156 737 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 ENPEPQ07075 957 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 HOOK3Q86VS8 718 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 FAM213AQ9BRX8 229 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 MTRF1LQ9UGC7 380 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 PCYOX1Q9UHG3 505 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 FAM169AQ9Y6X4 670 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 KIAA0391O15091 583 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.649e-7■■■■□ 22.1
LSG1-201ENST00000265245 GMPSP49915 693 aaPredicted RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 LIG4P49917 911 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 CDR1P51861 262 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 HMGCS2P54868 508 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 RWDD2BP57060 319 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 PTGISQ16647 500 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 CCDC137Q6PK04 289 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 PPM1EQ8WY54 764 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 FNBP1Q96RU3 617 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 KIAA1586Q9HCI6 787 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 CYP26B1Q9NR63 512 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 CNOT8Q9UFF9 292 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 SRRM3A6NNA2 597 aaPredicted RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 PYGMP11217 842 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 CTNNA2P26232 953 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 ACAD10Q6JQN1 1059 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 MIS18BP1Q6P0N0 1132 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 SLC13A5Q86YT5 568 aaPredicted RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 CCDC105Q8IYK2 499 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 DHX38Q92620 1227 aaKnown RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 CD101Q93033 1021 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 POLR3FQ9H1D9 316 aaPredicted RBP11.05□□□□□ -0.64
LSG1-201ENST00000265245 ZDHHC18Q9NUE0 388 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
LSG1-201ENST00000265245 NFASCO94856 1347 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 ADGRA3Q8IWK6 1321 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 STAM2O75886 525 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 PTPRAP18433 802 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 DSG3P32926 999 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 ACTR2P61160 394 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 XKR3Q5GH77 459 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 CCDC60Q8IWA6 550 aaPredicted RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 FBXO25Q8TCJ0 367 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 TATDN2Q93075 761 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 BTBD6Q96KE9 485 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 CEP89Q96ST8 783 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 ACAD9Q9H845 621 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 ZNF214Q9UL59 606 aaPredicted RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 PMS2P54278 862 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 PPP2R2AP63151 447 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 STRN3Q13033 797 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 DENND2CQ68D51 928 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 MICALCLQ6ZW33 695 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 REPS2Q8NFH8 660 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 PABPC3Q9H361 631 aaKnown RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 ARHGAP28Q9P2N2 729 aa11.04□□□□□ -0.64
LSG1-201ENST00000265245 CNOT7Q9UIV1 285 aaKnown RBP11.04□□□□□ -0.64
LSG1-201ENST00000265245 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 EXTL3O43909 919 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 RGS20O76081 388 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 KIAA0754O94854 1291 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 TNNI1P19237 187 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 BPIFB4P59827 614 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 CLEC16AQ2KHT3 1053 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
LSG1-201ENST00000265245 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 CXorf56Q9H5V9 222 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 A0A087WUV0 522 aaPredicted RBP11.03□□□□□ -0.64
LSG1-201ENST00000265245 E7EVH7 732 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 STBD1O95210 358 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 MAPK4P31152 587 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PTGIRP43119 386 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 MAGOHP61326 146 aaKnown RBP11.03□□□□□ -0.64
LSG1-201ENST00000265245 NLRP14Q86W24 1093 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 TRIM11Q96F44 468 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 TXLNGYQ9BZA5 131 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 ANAPC7Q9UJX3 599 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PCDHB2Q9Y5E7 798 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 NFKBIEO00221 500 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 NUDT17P0C025 328 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 FNTAP49354 379 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms