RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 GJB7Q6PEY0 223 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 ZBTB33Q86T24 672 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 SESTD1Q86VW0 696 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 KLHDC9Q8NEP7 349 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 TAS1R2Q8TE23 839 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 ZNF516Q92618 1163 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 IFIH1Q9BYX4 1025 aaKnown RBP15.33■□□□□ 0.05
SDF2-201ENST00000247020 PDZD7Q9H5P4 517 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 UBE2TQ9NPD8 197 aaPredicted RBP15.33■□□□□ 0.05
SDF2-201ENST00000247020 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.05
SDF2-201ENST00000247020 HDAC6Q9UBN7 1215 aa15.33■□□□□ 0.05
SDF2-201ENST00000247020 A0A1B0GUA9 196 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ZNF263O14978 683 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 TSPAN1O60635 241 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 CLTAP09496 248 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ARF4P18085 180 aaPredicted RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 CAP1Q01518 475 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 KIF5AQ12840 1032 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ZBTB41Q5SVQ8 909 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 TDRD10Q5VZ19 366 aaKnown RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 SYT10Q6XYQ8 523 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 PCSK9Q8NBP7 692 aaKnown RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ASB7Q9H672 318 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 LZTFL1Q9NQ48 299 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 GTF2IRD1Q9UHL9 959 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 MYADML2A6NDP7 307 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 FKTNO75072 461 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 CABYRO75952 493 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 HLA-DRAP01903 254 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 DARSP14868 501 aaKnown RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 TNFSF9P41273 254 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 PIK3CAP42336 1068 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 GNG11P61952 73 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 PTK2Q05397 1052 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 CD302Q8IX05 232 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 RAET1EQ8TD07 263 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 SHC3Q92529 594 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 ZNF668Q96K58 619 aaPredicted RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 FAM49AQ9H0Q0 323 aaPredicted RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 RPF1Q9H9Y2 349 aaKnown RBP15.32■□□□□ 0.04
SDF2-201ENST00000247020 C1orf112Q9NSG2 853 aa15.32■□□□□ 0.04
SDF2-201ENST00000247020 TREHO43280 583 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 EIF4BP23588 611 aaKnown RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 MAGEA1P43355 309 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 CRYBB1P53674 252 aaPredicted RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 WNT7BP56706 349 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 ARID5AQ03989 594 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 TRIM32Q13049 653 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 BIRC3Q13489 604 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 ARHGAP44Q17R89 818 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 KIZQ2M2Z5 673 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 RUFY4Q6ZNE9 571 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 RPAINQ86UA6 219 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 IMPG2Q9BZV3 1241 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 DNAI1Q9UI46 699 aa15.31■□□□□ 0.04
SDF2-201ENST00000247020 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
SDF2-201ENST00000247020 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 BTNL10A8MVZ5 291 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 VNN1O95497 513 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 PGK1P00558 417 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 ELNP15502 786 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 TBXAS1P24557 533 aaPredicted RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 CASQ1P31415 396 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 CYP27A1Q02318 531 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 HIC1Q14526 733 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 NOTUMQ6P988 496 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 RSPH3Q86UC2 560 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 THNSL1Q8IYQ7 743 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 DNAJB3Q8WWF6 145 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 ANKRD36BP1Q96IX9 119 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 DDX20Q9UHI6 824 aaKnown RBP15.3■□□□□ 0.04
SDF2-201ENST00000247020 ADAMTS1Q9UHI8 967 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 INTUQ9ULD6 942 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 NENFQ9UMX5 172 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms