RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 MKL1Q969V6 931 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 DHX35Q9H5Z1 703 aaKnown RBP12.11□□□□□ -0.47
EFNB2-201ENST00000245323 CHD2O14647 1828 aaKnown RBP12.11□□□□□ -0.47
EFNB2-201ENST00000245323 TADA3O75528 432 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 CASP5P51878 434 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 IL17AQ16552 155 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 CXCL17Q6UXB2 119 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 RHOT2Q8IXI1 618 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 FBXL16Q8N461 479 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 PDCD6IPQ8WUM4 868 aaKnown RBP12.11□□□□□ -0.47
EFNB2-201ENST00000245323 TBC1D31Q96DN5 1066 aa12.11□□□□□ -0.47
EFNB2-201ENST00000245323 CPSF3Q9UKF6 684 aaKnown RBP12.11□□□□□ -0.47
EFNB2-201ENST00000245323 TIMM13Q9Y5L4 95 aaPredicted RBP12.11□□□□□ -0.47
EFNB2-201ENST00000245323 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 SDC4P31431 198 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 USP50Q70EL3 339 aaPredicted RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 SKA2Q8WVK7 121 aaPredicted RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 FAM114A2Q9NRY5 505 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 BCAR1P56945 870 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 TSPY1Q01534 308 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 FUT2Q10981 343 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 LACRTQ9GZZ8 138 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 CYP39A1Q9NYL5 469 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 A0A087X0T9 212 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 ZBED1O96006 694 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 FAM228BP0C875 321 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 AKAP5P24588 427 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 LGSNQ5TDP6 509 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
EFNB2-201ENST00000245323 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 PLAAQ9Y263 795 aa12.1□□□□□ -0.47
EFNB2-201ENST00000245323 TADA2AO75478 443 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SEPT6Q14141 434 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 BTBD6Q96KE9 485 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 XRN1Q8IZH2 1706 aaKnown RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 CLTAP09496 248 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 TBXAS1P24557 533 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 PDE1BQ01064 536 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 CCDC33Q8N5R6 958 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SPIRE2Q8WWL2 714 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SLIT2O94813 1529 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 CALCAP01258 141 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 CXCL8P10145 99 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 GTF2H1P32780 548 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 PLCB4Q15147 1175 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 XRRA1Q6P2D8 792 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 C1orf228Q6PIY5 440 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 VSIG10LQ86VR7 867 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SMC1BQ8NDV3 1235 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 GHRP10912 638 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 RFC5P40937 340 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 RBP5P82980 135 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 SDCCAG8Q86SQ7 713 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 MCUQ8NE86 351 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 HPDLQ96IR7 371 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 PRMT7Q9NVM4 692 aaPredicted RBP12.09□□□□□ -0.47
EFNB2-201ENST00000245323 RNF14Q9UBS8 474 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 HES2Q9Y543 173 aa12.09□□□□□ -0.47
EFNB2-201ENST00000245323 RASGRF2O14827 1237 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 INHBAP08476 426 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 SRGAP2BP0DMP2 458 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 ITGA4P13612 1032 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
EFNB2-201ENST00000245323 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 Q4G0T1 1027 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 RNF180Q86T96 592 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 VPS52Q8N1B4 723 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 FAM81BQ96LP2 452 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 CNTRLQ7Z7A1 2325 aa12.08□□□□□ -0.48
EFNB2-201ENST00000245323 I3L4J1 428 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms