RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CCDC130P13994 396 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 CLVS1Q8IUQ0 354 aaPredicted RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 SPTBN1Q01082 2364 aaKnown RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 A0A1W2PP64 1363 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 EYA2O00167 538 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 LAD1O00515 517 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 ASAP2O43150 1006 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 IMPG1Q17R60 797 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 ODR4Q5SWX8 454 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 PSTPIP2Q9H939 334 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 FANCEQ9HB96 536 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 DMAP1Q9NPF5 467 aaPredicted RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 MPP6Q9NZW5 540 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 TULP2O00295 520 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 PHF2O75151 1096 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 ADAMTS2O95450 1211 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 ITGA6P23229 1130 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 RSRC2Q7L4I2 434 aaKnown RBP11.65□□□□□ -0.55
USP31-201ENST00000219689 MAST1Q9Y2H9 1570 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 CHD2O14647 1828 aaKnown RBP11.65□□□□□ -0.55
USP31-201ENST00000219689 ZNF618Q5T7W0 954 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 LLGL2Q6P1M3 1020 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 SUN5Q8TC36 379 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 CCDC28BQ9BUN5 200 aa11.65□□□□□ -0.55
USP31-201ENST00000219689 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.55
USP31-201ENST00000219689 RNF103O00237 685 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 PAX3P23760 479 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 SCNN1BP51168 640 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 MAPRE1Q15691 268 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 CHI3L2Q15782 390 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 SDR42E1Q8WUS8 393 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 SENP1Q9P0U3 644 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 MED12Q93074 2177 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TLR3O15455 904 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 TRIP4Q15650 581 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 MTDHQ86UE4 582 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 PLEKHG4BQ96PX9 1271 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 FAM58BPP0C7Q3 252 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 PTGS2P35354 604 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TBCCQ15814 346 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 RGS21Q2M5E4 152 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 IFNL2Q8IZJ0 200 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 SNX19Q92543 992 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CHID1Q9BWS9 393 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TLR7Q9NYK1 1049 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 HEY1Q9Y5J3 304 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ARPC4P59998 168 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 FRA10AC1Q70Z53 315 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 AGAP11Q8TF27 550 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 MAGI1Q96QZ7 1491 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 RAD51BO15315 384 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 MYL1P05976 194 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 METTL13Q8N6R0 699 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ANKZF1Q9H8Y5 726 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 PSMC3IPQ9P2W1 217 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 FASTKD1Q53R41 847 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 EML4Q9HC35 981 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 SYNDIG1LA6NDD5 238 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CYTH3O43739 400 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TCHHL1Q5QJ38 904 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 TNIP2Q8NFZ5 429 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 ALKBH8Q96BT7 664 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 AK8Q96MA6 479 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CCSER1Q9C0I3 900 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 DHX36Q9H2U1 1008 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 PCMTD2Q9NV79 361 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 CLIC5Q9NZA1 410 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 DOCK9Q9BZ29 2069 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 HNRNPDLO14979 420 aaKnown RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 EPHB2P29323 1055 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 NCKAP1LP55160 1127 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 IRGCQ6NXR0 463 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
USP31-201ENST00000219689 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TRAPPC8Q9Y2L5 1435 aa11.64□□□□□ -0.55
USP31-201ENST00000219689 TRIM13O60858 407 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 AKR1B1P15121 316 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 GALK1P51570 392 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 PUDPQ08623 228 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 SLC29A2Q14542 456 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms