RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MESDQ14696 234 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ZACNQ401N2 412 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 LMBRD2Q68DH5 695 aaPredicted RBP8.87□□□□□ -0.99
VAMP3-201ENST00000054666 EEPD1Q7L9B9 569 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ZBTB8OSQ8IWT0 167 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 MREGQ8N565 214 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 TCP11Q8WWU5 503 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 RPS6KC1Q96S38 1066 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 PCDHB18PQ96TA0 734 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ZSWIM1Q9BR11 485 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 PI4K2AQ9BTU6 479 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 NUP85Q9BW27 656 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 IMPG2Q9BZV3 1241 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 RAB17Q9H0T7 212 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ALG6Q9Y672 507 aa8.87□□□□□ -0.99
VAMP3-201ENST00000054666 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 HARSP12081 509 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CAPN2P17655 700 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 GUCY2FP51841 1108 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CLDN10P78369 228 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CAPSQ13938 189 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TARBP2Q15633 366 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 WDR78Q5VTH9 848 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 DCAF12L1Q5VU92 463 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 DLK2Q6UY11 383 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 C15orf39Q6ZRI6 1047 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 FASTKD5Q7L8L6 764 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 RIN2Q8WYP3 895 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 DHX38Q92620 1227 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TATDN2Q93075 761 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 LRRC45Q96CN5 670 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CDCA5Q96FF9 252 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CLMNQ96JQ2 1002 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 MMP19Q99542 508 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CGRRF1Q99675 332 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 JPH2Q9BR39 696 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TARS2Q9BW92 718 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 WNT8AQ9H1J5 351 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ACP6Q9NPH0 428 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 AMACRQ9UHK6 382 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 RASAL2Q9UJF2 1139 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 AGPSO00116 658 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CLDN3O15551 220 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ADCY3O60266 1144 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CYP1A2P05177 515 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 MYBL1P10243 752 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ITGA4P13612 1032 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 COMTP21964 271 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 PTENP60484 403 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 LY6KQ17RY6 165 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CLEC16AQ2KHT3 1053 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 IER5Q5VY09 327 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TDRD10Q5VZ19 366 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 NAA35Q5VZE5 725 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ACAD10Q6JQN1 1059 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ZPBP2Q6X784 338 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 ARMC9Q7Z3E5 817 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TSEN2Q8NCE0 465 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 PCYT2Q99447 389 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 MRPL4Q9BYD3 311 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 C2orf40Q9H1Z8 148 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 FAM114A2Q9NRY5 505 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 CNOT8Q9UFF9 292 aaKnown RBP8.86□□□□□ -0.99
VAMP3-201ENST00000054666 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 PCDHB2Q9Y5E7 798 aa8.86□□□□□ -0.99
VAMP3-201ENST00000054666 UTRNP46939 3433 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 A0A0B4J269 797 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 GOLGA6L10A6NI86 522 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 TTI1O43156 1089 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CNMDO75829 334 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 C4BPAP04003 597 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MARK3P27448 753 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 NSFP46459 744 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 AP3M2P53677 418 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 NOP14P78316 857 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ZNF211Q13398 564 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MTMR3Q13615 1198 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CUL2Q13617 745 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 DHX34Q14147 1143 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MXD4Q14582 209 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 DPY19L2Q6NUT2 758 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PPP1R2P3Q6NXS1 205 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 TRIM72Q6ZMU5 477 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 USP50Q70EL3 339 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 OPTNQ96CV9 577 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 SH3GL2Q99962 352 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 TCHPQ9BT92 498 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MTUS1Q9ULD2 1270 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms