RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 VimP20152 466 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Dpep1P31428 410 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Resp18P47939 175 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 GssP51855 474 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Uchl4P58321 233 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Trim37Q6PCX9 961 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Asnsd1Q8BFS9 627 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 6820408C15RikQ8BJX2 354 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Dis3lQ8C0S1 1053 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Clstn3Q99JH7 956 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Akirin1Q99LF1 191 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Prl2c5Q9JLV9 222 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Magi2Q9WVQ1 1275 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Vnn1Q9Z0K8 512 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 HttP42859 3119 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Wdr72D3YYM4 1114 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 GmnnO88513 206 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fcer2P20693 331 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Plpp4Q0VBU9 271 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 SpoplQ2M2N2 392 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ric8aQ3TIR3 530 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 EsrrbQ61539 433 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tas2r125Q7M710 311 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fut11Q8BHC9 489 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 DutQ8VCG1 200 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tor1aip1Q921T2 595 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gpr37l1Q99JG2 481 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Spatc1lQ9D9W0 342 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Acox2Q9QXD1 681 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cyp4a29A0A087WPC3 509 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Exoc3l2D3YUP5 789 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Calb1P12658 261 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tnnc1P19123 161 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cxcl12P40224 93 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 EdnrbP48302 442 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rrp1P56183 494 aaKnown RBP7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tbx3P70324 741 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Hdhd2Q3UGR5 259 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Nat8lQ3UGX3 299 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Vps51Q3UVL4 782 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Oog4Q4G0C7 502 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fmnl3Q6ZPF4 1028 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Phf24Q80TL4 400 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rpp40Q8R1F9 363 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rem2Q8VEL9 341 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Slc14a1Q8VHL0 384 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Lrrc71Q9D3W5 558 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Usp29Q9ES63 869 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tnfsf13bQ9WU72 309 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Msl3Q9WVG9 525 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Jbts17Q8CE72 3214 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ttc38A3KMP2 465 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 1700064H15RikD3Z4D4 81 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ugt1a6bK9J7B2 531 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Psmb7P70195 277 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cct5P80316 541 aaKnown RBP7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tatdn3Q3U1C6 294 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ugt1a6Q64435 531 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ugt1a7cQ6ZQM8 531 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 FsbpQ8BKE5 299 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gjc2Q8BQU6 440 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccser1Q8C0C4 895 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Klhl30Q8C3F7 581 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Colgalt1Q8K297 617 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gga1Q8R0H9 635 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ribc1Q9D0B8 379 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc97Q9DBT3 340 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Capn12Q9ER56 720 aa7.4□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm7173A0A0G2JEB6 3132 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lrrc73B2RWC4 316 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr1354E9Q5G9 310 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cdc6O89033 562 aaKnown RBP7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 IapP03975 557 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ccnd2P30280 289 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 DmpkP54265 631 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Hmgb1P63158 215 aaKnown RBP7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 DhpsQ3TXU5 369 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Mvb12bQ6KAU4 317 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 RragaQ80X95 313 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 EmsyQ8BMB0 1264 aaKnown RBP7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tmem87aQ8BXN9 555 aa7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rpl17Q9CPR4 184 aaKnown RBP7.4□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Malrd1A2AJX4 2123 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm1993A6X8I0 212 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm9992B2RWK3 458 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 SlxD3Z347 212 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Spata31E9QAF0 1014 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr743L7N1Y2 311 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 EgfP01132 1217 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Krt13P08730 437 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cyp2b9P12790 491 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lamp2P17047 415 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cd72P21855 354 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Capza3P70190 299 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lrrc55Q3UY51 311 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Mkrn3Q60764 544 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Unc93aQ710D3 458 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Iffo1Q8BXL9 562 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lin9Q8C735 542 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ifi205aQ8CGE8 404 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms