RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Nkx2-5P42582 318 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ndufs6P52503 116 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Senp1P59110 640 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Sec31aQ3UPL0 1230 aaKnown RBP24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 MmeQ61391 750 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Rnf139Q7TMV1 668 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Trim65Q8BFW4 522 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Zc3h6Q8BYK8 1177 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Odf2A3KGV1 830 aaKnown RBP24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gm10801F7C7Q0 168 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gm17535J3KMR8 224 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Mmp3P28862 477 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ifnar1P33896 590 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Tmem232Q5K6N0 675 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Zcchc2Q69ZB8 1166 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Klhl17Q6TDP3 640 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Olfr392Q7TRX6 312 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Cdk17Q8K0D0 523 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Drap1Q9D6N5 205 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Nol7Q9D7Z3 254 aaKnown RBP24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Rnf103Q9R1W3 683 aa24.61■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Rnf19bA2A7Q9 732 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ptchd4B9EKX1 904 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Muc3aQ3U5A2 218 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 LbrQ3U9G9 626 aaKnown RBP24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Fhod1Q6P9Q4 1197 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Elmo3Q8BYZ7 720 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Olfr1494Q8VGP8 315 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Q91Z58 1206 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Atp6v0a4Q920R6 833 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Tmem132aQ922P8 1018 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Fam187aQ9D3R5 417 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Rnf6Q9DBU5 667 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ipo7Q9EPL8 1038 aaKnown RBP24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Cwc15Q9JHS9 229 aaKnown RBP24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ankrd16A2AS55 361 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 DgkkE9Q7N4 1118 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Vsnl1P62761 191 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Grm1P97772 1199 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Lrrc1Q80VQ1 524 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 RimklbQ80WS1 387 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 C1qtnf12Q8R2Z0 308 aa24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Alg13Q9D8C3 1166 aaKnown RBP24.6■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gm12800B1AUV4 484 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gimd1E9PW74 217 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gm12794L7MTS5 483 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Alkbh1P0CB42 389 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Q3TTJ4 293 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Tas2r134Q7TQB0 298 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Kctd6Q8BNL5 237 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Asic2Q925H0 512 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Tpcn1Q9EQJ0 817 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Sertad2Q9JJG5 309 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gfpt2Q9Z2Z9 682 aa24.59■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Unc13dB2RUP2 1085 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Csde1Q91W50 798 aaKnown RBP24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 H2-OaQ9QWV1 250 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Lama2Q60675 3118 aaKnown RBP24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ralgapa2A3KGS3 1872 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 IapP03975 557 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Pik3caP42337 1068 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Lrig2Q52KR2 1054 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Pabpc4Q6PHQ9 660 aaKnown RBP24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 WhrnQ80VW5 918 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Cct8l1Q80YT3 562 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Lin9Q8C735 542 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Epc1Q8C9X6 813 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 AdarQ99MU3 1178 aaKnown RBP24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Mageb16Q9CWV4 363 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 ToporslQ9D2F8 683 aa24.58■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Gm4788E9Q8B5 879 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Prdm4Q80V63 803 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Lamtor4Q8CF66 99 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cbwd1Q8VEH6 393 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Olfr1499Q8VG65 314 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 AclyQ91V92 1091 aaKnown RBP24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Rilpl1Q9JJC6 406 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Klra17Q9JMA4 273 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Slc6a20bO88575 635 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cyp2c38P56655 490 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Asprv1Q09PK2 339 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 HomezQ80W88 542 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Vipas39Q8BGQ1 491 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 4933409G03RikQ8C5U0 320 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Kct2Q8K201 259 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Sash3Q8K352 380 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Vmn1r218Q8R261 298 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 AdigQ8R400 80 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Sh2b1Q91ZM2 756 aa24.57■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Mark3Q03141 753 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Top1Q04750 767 aaKnown RBP24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Asic3Q6X1Y6 530 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Fgd5Q80UZ0 1219 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 B3glctQ8BHT6 489 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 TtpalQ9D3D0 343 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cbx8Q9QXV1 362 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Ripk3Q9QZL0 486 aa24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Zc3h4Q6ZPZ3 1304 aaKnown RBP24.56■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cd86P42082 309 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Hace1Q3U0D9 909 aa24.55■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms