RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Btbd18A0A0A6YY25 723 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Iqca1lA6H690 825 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tekt5G5E8A8 557 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tom1O88746 492 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Msr1P30204 458 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmc5Q32NZ6 967 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Flot2Q60634 428 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Stip1Q60864 543 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atg9aQ68FE2 551 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Wnk4Q80UE6 1222 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Wdr35Q8BND3 1181 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 NelfcdQ922L6 591 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmod4Q9JLH8 345 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cd2apQ9JLQ0 637 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm29554A0A087WNW4 188 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rad51ap2G3UW63 976 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp9aO70228 1047 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 MybP06876 636 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rag1P15919 1040 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SnrpfP62307 86 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc24a2Q14BI1 711 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Armcx5Q3UZB0 606 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rgl1Q60695 768 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Galnt5Q8C102 930 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 BicralQ8CHH5 1074 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zfp566Q8VCI1 386 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ptpn4Q9WU22 926 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 AK157302I3ITR1 129 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hspa2P17156 633 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Phactr1Q2M3X8 580 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam160a1Q505K2 1081 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rgl2Q61193 778 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 UvragQ8K245 698 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ChiaQ91XA9 473 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Isca1Q9D924 129 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pus7B7ZNL8 666 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 A1cfQ5YD48 595 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hsph1Q61699 858 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 NostrinQ6WKZ7 506 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Kcns3Q8BQZ8 491 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Btbd6Q8K2J9 488 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CrotQ9DC50 612 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Supt3B0QZW4 406 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ugt1a8D3Z748 530 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ugt1a10E9PXN7 530 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Speer4cG3UXD1 256 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm10354K7N6A0 256 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sema4dO09126 861 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hsd17b1P51656 344 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CyldQ80TQ2 952 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Snx30Q8CE50 437 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rnf8Q8VC56 488 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 FdpsQ920E5 353 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Them5Q9CQJ0 248 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Timm50Q9D880 353 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fads3Q9JJE7 449 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm32742A0A1B0GT42 1604 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Usp10P52479 792 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ankmy2Q3TPE9 440 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Spout1Q3UHX9 385 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nfu1Q9QZ23 255 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Wdr49A0A0N4SUK7 710 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm11549A0A286YD83 63 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Eif3dO70194 548 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PdgfraP26618 1089 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Vps33bP59016 617 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nop9Q8BMC4 636 aaKnown RBP10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Kirrel3Q8BR86 778 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zbtb1Q91VL9 713 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rnf31Q924T7 1066 aa10.68□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lzts3A2AHG0 700 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Foxn2E9Q7L6 429 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Prpf18Q8BM39 342 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hspa13Q8BM72 471 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Trim47Q8C0E3 641 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gucy1a2F8VQK3 730 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Eif3eP60229 445 aaKnown RBP10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmprss15P97435 1069 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ndufaf2Q59J78 168 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Heatr9Q5QNV8 569 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zhx2Q8C0C0 836 aaKnown RBP10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 OplahQ8K010 1288 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Caap1Q8VDY9 356 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp5c1Q91VR2 298 aaKnown RBP10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Clca1Q9D7Z6 913 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fxr2Q9WVR4 673 aaKnown RBP10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CluhQ5SW19 1315 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PtenO08586 403 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp13a5Q3TYU2 1216 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 A430089I19RikQ8C9W1 407 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tagln3Q9R1Q8 199 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Depdc5P61460 1591 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CenpaO35216 134 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gsta3P30115 221 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PpargP37238 505 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Inpp1P49442 396 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Soat1Q61263 540 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Olfr832Q7TRG9 312 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Llgl1Q80Y17 1036 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tbl3Q8C4J7 801 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms