RNA–Protein interactions for RNA: tC(GCA)P1

tC(GCA)P1, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P1tC(GCA)P1 STE50P25344 346 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RPC34P32910 317 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MTC2P34246 357 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 CBT1P36038 271 aaPredicted RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 PMU1P36069 295 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YBR184WP38299 523 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 SSH1P38353 490 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MNN9P39107 395 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TIR3P40552 269 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RET2P43621 546 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 BUL1P48524 976 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 IMD3P50095 523 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MTL1P53214 551 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 IMO32P53219 342 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YGR054WP53235 642 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RRN9P53437 365 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RPL21AQ02753 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 AIM36Q03798 255 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TVP15Q03860 143 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 SEC13Q04491 297 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YLR173WQ06247 608 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ARO10Q06408 635 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 VTS1Q08831 523 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)P1tC(GCA)P1 ULA1Q12059 462 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RIO1Q12196 484 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 NOP56Q12460 504 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)P1tC(GCA)P1 RPL21BQ12672 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ADH4P10127 382 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 CCA1P21269 546 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MEK1P24719 497 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MLF3P32047 452 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RPN2P32565 945 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ISC10P32645 267 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ECM31P38122 312 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ALP1P38971 573 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 SMX2P40204 77 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 CUS2P53830 285 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YPL067CQ02754 198 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 STD1Q02794 444 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RRN5Q02983 363 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TDA1Q03533 586 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 HMO1Q03973 246 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YDR415CQ04033 374 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ARP10Q04549 284 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MCH1Q07376 486 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YLR126CQ12288 251 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YOL114CQ12322 202 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 BBP1Q12365 385 aa2.35□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TRP4P07285 380 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MSS18P08593 268 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 CUP2P15315 225 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 VMA3P25515 160 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YCR061WP25639 631 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 COQ2P32378 372 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 LAS1P36146 502 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 OLA1P38219 394 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RTC2P38279 296 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 AMN1P38285 549 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 LIN1P38852 340 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YER137CP40083 148 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 HIS6P40545 261 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 LIA1P47120 325 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MRH4P53166 561 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YNR048WP53740 393 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YMR254CQ04838 102 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 ATG26Q06321 1198 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RRP9Q06506 573 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 YLR413WQ06689 675 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RFU1Q08003 200 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 SPC3Q12133 184 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 MHF2Q3E829 80 aa2.34□□□□□ -2.03
tC(GCA)P1tC(GCA)P1 RER1P25560 188 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 IMP1P28627 190 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RAD23P32628 398 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ALK2P32789 676 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YKL075CP36083 450 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MLH1P38920 769 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MTW1P39731 289 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RPR2P40571 144 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MID1P41821 548 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 URB2P47108 1174 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 BAT2P47176 376 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YIP1P53039 248 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 CAX4P53223 239 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 COG2P53271 262 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 OKP1P53298 406 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 HHT1P61830 136 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 COX12Q01519 83 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 TRI1Q05024 226 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RXT3Q07458 294 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 NDE2Q07500 545 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SIA1Q12212 622 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MPD1Q12404 318 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RIB3Q99258 208 aa2.33□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 REP2P03872 296 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RPP1BP10622 106 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms