RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B STE50P25344 346 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B RPC34P32910 317 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B MTC2P34246 357 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B CBT1P36038 271 aaPredicted RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B PMU1P36069 295 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B YBR184WP38299 523 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B SSH1P38353 490 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B MNN9P39107 395 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B TIR3P40552 269 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B RET2P43621 546 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B BUL1P48524 976 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B IMD3P50095 523 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B MTL1P53214 551 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B IMO32P53219 342 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B YGR054WP53235 642 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B RRN9P53437 365 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B RPL21AQ02753 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B AIM36Q03798 255 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B TVP15Q03860 143 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B SEC13Q04491 297 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B YLR173WQ06247 608 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B ARO10Q06408 635 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B VTS1Q08831 523 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)BtC(GCA)B ULA1Q12059 462 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B RIO1Q12196 484 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B NOP56Q12460 504 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)BtC(GCA)B RPL21BQ12672 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
tC(GCA)BtC(GCA)B ADH4P10127 382 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B CCA1P21269 546 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B MEK1P24719 497 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B MLF3P32047 452 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B RPN2P32565 945 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B ISC10P32645 267 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B ECM31P38122 312 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B ALP1P38971 573 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B SMX2P40204 77 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B CUS2P53830 285 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B YPL067CQ02754 198 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B STD1Q02794 444 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B RRN5Q02983 363 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B TDA1Q03533 586 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B HMO1Q03973 246 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B YDR415CQ04033 374 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B ARP10Q04549 284 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B MCH1Q07376 486 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B YLR126CQ12288 251 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B YOL114CQ12322 202 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B BBP1Q12365 385 aa2.35□□□□□ -2.03
tC(GCA)BtC(GCA)B TRP4P07285 380 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B MSS18P08593 268 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B CUP2P15315 225 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B VMA3P25515 160 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B YCR061WP25639 631 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B COQ2P32378 372 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B LAS1P36146 502 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B OLA1P38219 394 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B RTC2P38279 296 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B AMN1P38285 549 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B LIN1P38852 340 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B YER137CP40083 148 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B HIS6P40545 261 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B LIA1P47120 325 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B MRH4P53166 561 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B YNR048WP53740 393 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B YMR254CQ04838 102 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B ATG26Q06321 1198 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B RRP9Q06506 573 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B YLR413WQ06689 675 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B RFU1Q08003 200 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B SPC3Q12133 184 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B MHF2Q3E829 80 aa2.34□□□□□ -2.03
tC(GCA)BtC(GCA)B RER1P25560 188 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B IMP1P28627 190 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B RAD23P32628 398 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B ALK2P32789 676 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B YKL075CP36083 450 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B MLH1P38920 769 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B MTW1P39731 289 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B RPR2P40571 144 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B MID1P41821 548 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B URB2P47108 1174 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B BAT2P47176 376 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B YIP1P53039 248 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B CAX4P53223 239 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B COG2P53271 262 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B OKP1P53298 406 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B HHT1P61830 136 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B COX12Q01519 83 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B TRI1Q05024 226 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B RXT3Q07458 294 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B NDE2Q07500 545 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B SIA1Q12212 622 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B MPD1Q12404 318 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B RIB3Q99258 208 aa2.33□□□□□ -2.04
tC(GCA)BtC(GCA)B REP2P03872 296 aa2.32□□□□□ -2.04
tC(GCA)BtC(GCA)B RPP1BP10622 106 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 120.3 ms