RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 RCN1P36054 211 aa-0.67□□□□□ -2.52
snR48snR48 YSW1P38280 609 aa-0.67□□□□□ -2.52
snR48snR48 GDT1P38301 280 aaPredicted RBP-0.67□□□□□ -2.52
snR48snR48 ARC15P40518 154 aaRIP-Chip data-0.67□□□□□ -2.52not detected
snR48snR48 EMI1Q04406 187 aa-0.67□□□□□ -2.52
snR48snR48 USB1Q12208 290 aaKnown RBP-0.67□□□□□ -2.52
snR48snR48 PAR32Q12515 295 aaKnown RBP-0.67□□□□□ -2.52
snR48snR48 RPC40P07703 335 aaKnown RBP-0.68□□□□□ -2.52
snR48snR48 RXT2P38255 430 aa-0.68□□□□□ -2.52
snR48snR48 NPT1P39683 429 aaKnown RBP-0.68□□□□□ -2.52
snR48snR48 GDI1P39958 451 aaKnown RBP-0.68□□□□□ -2.52
snR48snR48 YIL001WP40560 513 aa-0.68□□□□□ -2.52
snR48snR48 YGR026WP53217 278 aa-0.68□□□□□ -2.52
snR48snR48 ASI3P53983 676 aa-0.68□□□□□ -2.52
snR48snR48 VPS60Q03390 229 aa-0.68□□□□□ -2.52
snR48snR48 YDR262WQ12331 272 aa-0.68□□□□□ -2.52
snR48snR48 BBP1Q12365 385 aa-0.68□□□□□ -2.52
snR48snR48 MRPL23Q12487 163 aaPredicted RBP-0.68□□□□□ -2.52
snR48snR48 ACC1Q00955 2233 aaKnown RBP-0.68□□□□□ -2.52
snR48snR48 Q0255P03881 472 aa-0.69□□□□□ -2.52
snR48snR48 RPL18AP0CX49 186 aaKnown RBP-0.69□□□□□ -2.52
snR48snR48 RPL18BP0CX50 186 aaKnown RBP-0.69□□□□□ -2.52
snR48snR48 CWP1P28319 239 aa-0.69□□□□□ -2.52
snR48snR48 SPT4P32914 102 aaPredicted RBP-0.69□□□□□ -2.52
snR48snR48 OKP1P53298 406 aa-0.69□□□□□ -2.52
snR48snR48 ARP5P53946 755 aa-0.69□□□□□ -2.52
snR48snR48 SXM1Q04175 944 aaKnown RBP-0.69□□□□□ -2.52
snR48snR48 COS2P0CX12 379 aa-0.7□□□□□ -2.52
snR48snR48 COS3P0CX13 379 aa-0.7□□□□□ -2.52
snR48snR48 YHR212W-AP0CX91 67 aa-0.7□□□□□ -2.52
snR48snR48 RSR1P13856 272 aa-0.7□□□□□ -2.52
snR48snR48 YKL162CP36052 402 aa-0.7□□□□□ -2.52
snR48snR48 YHR125WP38831 101 aa-0.7□□□□□ -2.52
snR48snR48 INA22P40576 216 aa-0.7□□□□□ -2.52
snR48snR48 CTF19Q02732 369 aa-0.7□□□□□ -2.52
snR48snR48 VPS20Q04272 221 aa-0.7□□□□□ -2.52
snR48snR48 TAF9Q05027 157 aa-0.7□□□□□ -2.52
snR48snR48 YNL146C-AQ3E7Z1 64 aa-0.7□□□□□ -2.52
snR48snR48 PET494P07390 489 aaPredicted RBP-0.71□□□□□ -2.52
snR48snR48 PET9P18239 318 aaKnown RBP-0.71□□□□□ -2.52
snR48snR48 ECM13P38195 257 aa-0.71□□□□□ -2.52
snR48snR48 SSH1P38353 490 aaKnown RBP-0.71□□□□□ -2.52
snR48snR48 CTR2P38865 189 aa-0.71□□□□□ -2.52
snR48snR48 SVP26P38869 228 aa-0.71□□□□□ -2.52
snR48snR48 FET3P38993 636 aa-0.71□□□□□ -2.52
snR48snR48 TIM21P53220 239 aa-0.71□□□□□ -2.52
snR48snR48 SDC1Q03323 175 aa-0.71□□□□□ -2.52
snR48snR48 NEJ1Q06148 342 aa-0.71□□□□□ -2.52
snR48snR48 MSA1Q08471 629 aa-0.71□□□□□ -2.52
snR48snR48 RPL9AP05738 191 aaKnown RBP-0.72□□□□□ -2.52
snR48snR48 TMA19P35691 167 aaKnown RBP-0.72□□□□□ -2.52
snR48snR48 YKL063CP35725 167 aa-0.72□□□□□ -2.52
snR48snR48 COS8P38723 381 aa-0.72□□□□□ -2.52
snR48snR48 RPL9BP51401 191 aaKnown RBP-0.72□□□□□ -2.52
snR48snR48 YMR279CQ03263 540 aa-0.72□□□□□ -2.52
snR48snR48 LOA1Q06508 300 aa-0.72□□□□□ -2.52
snR48snR48 APC9Q12107 265 aa-0.72□□□□□ -2.52
snR48snR48 YPR011CQ12251 326 aa-0.72□□□□□ -2.52
snR48snR48 SWD2P36104 329 aaPredicted RBP-0.73□□□□□ -2.53
snR48snR48 PRS4P38063 326 aaPredicted RBP-0.73□□□□□ -2.53
snR48snR48 PEX18P38855 283 aa-0.73□□□□□ -2.53
snR48snR48 YIA6P40556 373 aa-0.73□□□□□ -2.53
snR48snR48 TOS8P53147 276 aa-0.73□□□□□ -2.53
snR48snR48 VPS9P54787 451 aa-0.73□□□□□ -2.53
snR48snR48 ATC1Q04005 294 aa-0.73□□□□□ -2.53
snR48snR48 YLR030WQ07967 263 aa-0.73□□□□□ -2.53
snR48snR48 MSW1P04803 379 aa-0.74□□□□□ -2.53
snR48snR48 SEC22P22214 214 aa-0.74□□□□□ -2.53
snR48snR48 YHR180WP38868 163 aa-0.74□□□□□ -2.53
snR48snR48 MPP10P47083 593 aaKnown RBP-0.74□□□□□ -2.53
snR48snR48 SLX9P53251 210 aaPredicted RBP-0.74□□□□□ -2.53
snR48snR48 MPP6P53725 186 aaPredicted RBP-0.74□□□□□ -2.53
snR48snR48 YLR179CQ06252 201 aaKnown RBP-0.74□□□□□ -2.53
snR48snR48 POM33Q12164 279 aa-0.74□□□□□ -2.53
snR48snR48 PSY3Q12318 242 aa-0.74□□□□□ -2.53
snR48snR48 YHR139C-AO13536 103 aa-0.75□□□□□ -2.53
snR48snR48 STP22P25604 385 aa-0.75□□□□□ -2.53
snR48snR48 FZF1P32805 299 aa-0.75□□□□□ -2.53
snR48snR48 RPC37P36121 282 aa-0.75□□□□□ -2.53
snR48snR48 TVP38P36164 337 aa-0.75□□□□□ -2.53
snR48snR48 RCY1P39531 840 aa-0.75□□□□□ -2.53
snR48snR48 PGD1P40356 397 aa-0.75□□□□□ -2.53
snR48snR48 YML6P51998 286 aa-0.75□□□□□ -2.53
snR48snR48 ASR1Q06834 288 aa-0.75□□□□□ -2.53
snR48snR48 LCL2Q08045 131 aa-0.75□□□□□ -2.53
snR48snR48 COX5AP00424 153 aa-0.76□□□□□ -2.53
snR48snR48 RPL4AP10664 362 aaKnown RBP-0.76□□□□□ -2.53
snR48snR48 ICL1P28240 557 aaPredicted RBP-0.76□□□□□ -2.53
snR48snR48 VMA8P32610 256 aaKnown RBP-0.76□□□□□ -2.53
snR48snR48 SRY1P36007 326 aa-0.76□□□□□ -2.53
snR48snR48 BIG1P38813 335 aa-0.76□□□□□ -2.53
snR48snR48 PRM9P39551 298 aa-0.76□□□□□ -2.53
snR48snR48 SEC28P40509 296 aaKnown RBP-0.76□□□□□ -2.53
snR48snR48 RPL4BP49626 362 aaKnown RBP-0.76□□□□□ -2.53
snR48snR48 PEX31P53203 462 aa-0.76□□□□□ -2.53
snR48snR48 SPP2Q02521 185 aa-0.76□□□□□ -2.53
snR48snR48 YMR111CQ04461 462 aaPredicted RBP-0.76□□□□□ -2.53
snR48snR48 NFI1Q12216 726 aa-0.76□□□□□ -2.53
snR48snR48 NBL1Q3E7Y6 73 aa-0.76□□□□□ -2.53
snR48snR48 MET5P47169 1442 aa-0.77□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms