RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W SOD2P00447 233 aa8.63□□□□□ -1.03
MSF1YPR047W YGL041W-AP0C5N3 154 aa8.63□□□□□ -1.03
MSF1YPR047W YOX1P34161 385 aa8.63□□□□□ -1.03
MSF1YPR047W ANR2P36090 516 aaPredicted RBP8.63□□□□□ -1.03
MSF1YPR047W AIM10P39965 576 aaKnown RBP8.63□□□□□ -1.03
MSF1YPR047W CIN2P46670 268 aa8.63□□□□□ -1.03
MSF1YPR047W AAH1P53909 347 aa8.63□□□□□ -1.03
MSF1YPR047W NRK1P53915 240 aa8.63□□□□□ -1.03
MSF1YPR047W RNH201P53942 307 aa8.63□□□□□ -1.03
MSF1YPR047W PRP11Q07350 266 aaPredicted RBP8.63□□□□□ -1.03
MSF1YPR047W IRC25Q07951 179 aa8.63□□□□□ -1.03
MSF1YPR047W RFU1Q08003 200 aa8.63□□□□□ -1.03
MSF1YPR047W FRE3Q08905 711 aa8.63□□□□□ -1.03
MSF1YPR047W TGS1Q12052 315 aa8.63□□□□□ -1.03
MSF1YPR047W PUT3P25502 979 aaPredicted RBP8.62□□□□□ -1.03
MSF1YPR047W NDC1P32500 655 aa8.62□□□□□ -1.03
MSF1YPR047W SLM1P40485 686 aa8.62□□□□□ -1.03
MSF1YPR047W APJ1P53940 528 aa8.62□□□□□ -1.03
MSF1YPR047W NOG1Q02892 647 aaKnown RBP8.62□□□□□ -1.03
MSF1YPR047W YMR087WQ04299 284 aa8.62□□□□□ -1.03
MSF1YPR047W RBS1Q05672 457 aaKnown RBP8.62□□□□□ -1.03
MSF1YPR047W VCX1Q99385 411 aa8.62□□□□□ -1.03
MSF1YPR047W TDH2P00358 332 aaKnown RBP8.61□□□□□ -1.03
MSF1YPR047W SAG1P20840 650 aa8.61□□□□□ -1.03
MSF1YPR047W FAR1P21268 830 aa8.61□□□□□ -1.03
MSF1YPR047W IDP1P21954 428 aaKnown RBP8.61□□□□□ -1.03
MSF1YPR047W YKL102CP34249 101 aa8.61□□□□□ -1.03
MSF1YPR047W SHE1P38200 338 aa8.61□□□□□ -1.03
MSF1YPR047W MDM31P38880 579 aa8.61□□□□□ -1.03
MSF1YPR047W SUT1P53032 299 aaKnown RBP8.61□□□□□ -1.03
MSF1YPR047W TMA20P89886 181 aaPredicted RBP8.61□□□□□ -1.03
MSF1YPR047W YDR248CQ03786 193 aa8.61□□□□□ -1.03
MSF1YPR047W YDR114CQ04597 100 aa8.61□□□□□ -1.03
MSF1YPR047W IES6P32617 166 aa8.6□□□□□ -1.03
MSF1YPR047W TCM62P38228 572 aaKnown RBP8.6□□□□□ -1.03
MSF1YPR047W RMD6P39975 231 aa8.6□□□□□ -1.03
MSF1YPR047W SLI1P53304 468 aa8.6□□□□□ -1.03
MSF1YPR047W ARG5,6Q01217 863 aa8.6□□□□□ -1.03
MSF1YPR047W GRX5Q02784 150 aa8.6□□□□□ -1.03
MSF1YPR047W YDR514CQ04408 483 aa8.6□□□□□ -1.03
MSF1YPR047W SDS22P36047 338 aa8.59□□□□□ -1.03
MSF1YPR047W DLS1P40366 167 aa8.59□□□□□ -1.03
MSF1YPR047W FCY22Q12119 530 aa8.59□□□□□ -1.03
MSF1YPR047W YDL009CQ12210 107 aa8.59□□□□□ -1.03
MSF1YPR047W AFG1P32317 509 aa8.58□□□□□ -1.04
MSF1YPR047W PRP21P32524 280 aaPredicted RBP8.58□□□□□ -1.04
MSF1YPR047W TIF3P34167 436 aaKnown RBP8.58□□□□□ -1.04
MSF1YPR047W ECM4P36156 370 aa8.58□□□□□ -1.04
MSF1YPR047W TAF4P50105 388 aa8.58□□□□□ -1.04
MSF1YPR047W NSA1P53136 463 aaPredicted RBP8.58□□□□□ -1.04
MSF1YPR047W YLR152CP54072 576 aa8.58□□□□□ -1.04
MSF1YPR047W YKR005CQ02203 525 aa8.58□□□□□ -1.04
MSF1YPR047W GSH2Q08220 491 aa8.58□□□□□ -1.04
MSF1YPR047W THP3Q12049 470 aaKnown RBP8.58□□□□□ -1.04
MSF1YPR047W SGA1P08019 549 aa8.57□□□□□ -1.04
MSF1YPR047W THI2P38141 450 aa8.57□□□□□ -1.04
MSF1YPR047W PEX32P38292 413 aa8.57□□□□□ -1.04
MSF1YPR047W OSH7P38755 437 aa8.57□□□□□ -1.04
MSF1YPR047W PIC2P40035 300 aa8.57□□□□□ -1.04
MSF1YPR047W YER079WP40052 210 aaKnown RBP8.57□□□□□ -1.04
MSF1YPR047W GON7P46984 123 aa8.57□□□□□ -1.04
MSF1YPR047W PHB2P50085 310 aa8.57□□□□□ -1.04
MSF1YPR047W YGL159WP53110 370 aa8.57□□□□□ -1.04
MSF1YPR047W YDR179W-AQ03983 463 aa8.57□□□□□ -1.04
MSF1YPR047W GCD1P09032 578 aaPredicted RBP8.56□□□□□ -1.04
MSF1YPR047W HXT2P23585 541 aa8.56□□□□□ -1.04
MSF1YPR047W SOP4P39543 234 aaPredicted RBP8.56□□□□□ -1.04
MSF1YPR047W YLR346CQ06139 101 aa8.56□□□□□ -1.04
MSF1YPR047W YLR173WQ06247 608 aa8.56□□□□□ -1.04
MSF1YPR047W PIN3Q06449 215 aa8.56□□□□□ -1.04
MSF1YPR047W TSR2Q06672 205 aaKnown RBP8.56□□□□□ -1.04
MSF1YPR047W EDS1P38073 919 aa8.55□□□□□ -1.04
MSF1YPR047W YLF2P38746 405 aa8.55□□□□□ -1.04
MSF1YPR047W AVT4P50944 713 aa8.55□□□□□ -1.04
MSF1YPR047W UFD1P53044 361 aa8.55□□□□□ -1.04
MSF1YPR047W YPL067CQ02754 198 aa8.55□□□□□ -1.04
MSF1YPR047W UTP15Q04305 513 aaKnown RBP8.55□□□□□ -1.04
MSF1YPR047W YMR254CQ04838 102 aa8.55□□□□□ -1.04
MSF1YPR047W MRX10Q05648 414 aa8.55□□□□□ -1.04
MSF1YPR047W LUC7Q07508 261 aaPredicted RBP8.55□□□□□ -1.04
MSF1YPR047W YOR029WQ12243 111 aa8.55□□□□□ -1.04
MSF1YPR047W YMR105W-AQ8TGS8 64 aa8.55□□□□□ -1.04
MSF1YPR047W SIR2P06700 562 aa8.54□□□□□ -1.04
MSF1YPR047W ENA1P13587 1091 aa8.54□□□□□ -1.04
MSF1YPR047W DAL3P32459 195 aa8.54□□□□□ -1.04
MSF1YPR047W TCA17P32613 152 aa8.54□□□□□ -1.04
MSF1YPR047W PPZ2P33329 710 aa8.54□□□□□ -1.04
MSF1YPR047W MTH1P35198 433 aa8.54□□□□□ -1.04
MSF1YPR047W SSH1P38353 490 aaKnown RBP8.54□□□□□ -1.04
MSF1YPR047W YBR285WP38354 144 aa8.54□□□□□ -1.04
MSF1YPR047W LNP1P38878 278 aa8.54□□□□□ -1.04
MSF1YPR047W PMT6P42934 759 aa8.54□□□□□ -1.04
MSF1YPR047W ERJ5P43613 295 aaPredicted RBP8.54□□□□□ -1.04
MSF1YPR047W WSC2P53832 503 aa8.54□□□□□ -1.04
MSF1YPR047W ENA2Q01896 1091 aa8.54□□□□□ -1.04
MSF1YPR047W SPR28Q04921 423 aa8.54□□□□□ -1.04
MSF1YPR047W YOL114CQ12322 202 aa8.54□□□□□ -1.04
MSF1YPR047W ENA5Q12691 1091 aa8.54□□□□□ -1.04
MSF1YPR047W ACH1P32316 526 aa8.54□□□□□ -1.04
MSF1YPR047W ZRT3P34240 503 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 103.5 ms