RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W RPS8AP0CX39 200 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W RPS8BP0CX40 200 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W GLC7P32598 312 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W TCA17P32613 152 aa3.36□□□□□ -1.87
RET3YPL010W TOA1P32773 286 aa3.36□□□□□ -1.87
RET3YPL010W ARC19P33204 171 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W PAD1P33751 242 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RET3YPL010W PRY2P36110 329 aa3.36□□□□□ -1.87
RET3YPL010W MLH1P38920 769 aa3.36□□□□□ -1.87
RET3YPL010W PCL6P40038 420 aa3.36□□□□□ -1.87
RET3YPL010W BUR6P40096 142 aa3.36□□□□□ -1.87
RET3YPL010W PFS2P42841 465 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W SYF2P53277 215 aaPredicted RBP3.36□□□□□ -1.87
RET3YPL010W YNR064CP53750 290 aa3.36□□□□□ -1.87
RET3YPL010W DML1Q03652 475 aa3.36□□□□□ -1.87
RET3YPL010W YDR391CQ04170 232 aa3.36□□□□□ -1.87
RET3YPL010W YMR317WQ04893 1140 aa3.36□□□□□ -1.87
RET3YPL010W SFH1Q06168 426 aa3.36□□□□□ -1.87
RET3YPL010W PRP11Q07350 266 aaPredicted RBP3.36□□□□□ -1.87
RET3YPL010W IRC25Q07951 179 aa3.36□□□□□ -1.87
RET3YPL010W HRT1Q08273 121 aa3.36□□□□□ -1.87
RET3YPL010W RRS1Q08746 203 aaKnown RBP3.36□□□□□ -1.87
RET3YPL010W MCT1Q12283 360 aa3.36□□□□□ -1.87
RET3YPL010W MHF2Q3E829 80 aa3.36□□□□□ -1.87
RET3YPL010W YGR035W-AQ45U48 73 aa3.36□□□□□ -1.87
RET3YPL010W RHB1P25378 209 aa3.35□□□□□ -1.87
RET3YPL010W YCR100CP25606 316 aa3.35□□□□□ -1.87
RET3YPL010W VPH2P32341 215 aa3.35□□□□□ -1.87
RET3YPL010W RPN2P32565 945 aaKnown RBP3.35□□□□□ -1.87
RET3YPL010W GDH2P33327 1092 aaKnown RBP3.35□□□□□ -1.87
RET3YPL010W ALP1P38971 573 aa3.35□□□□□ -1.87
RET3YPL010W SWD1P39706 426 aa3.35□□□□□ -1.87
RET3YPL010W YDL186WP48568 277 aa3.35□□□□□ -1.87
RET3YPL010W YGL101WP53144 215 aa3.35□□□□□ -1.87
RET3YPL010W GEP7P53171 287 aa3.35□□□□□ -1.87
RET3YPL010W YPL108WQ02872 168 aaPredicted RBP3.35□□□□□ -1.87
RET3YPL010W RRN5Q02983 363 aa3.35□□□□□ -1.87
RET3YPL010W DIG2Q03373 323 aaKnown RBP3.35□□□□□ -1.87
RET3YPL010W BNA7Q04066 261 aa3.35□□□□□ -1.87
RET3YPL010W GPI17Q04080 534 aa3.35□□□□□ -1.87
RET3YPL010W ADH6Q04894 360 aaKnown RBP3.35□□□□□ -1.87
RET3YPL010W PSR1Q07800 427 aa3.35□□□□□ -1.87
RET3YPL010W SKI7Q08491 747 aaPredicted RBP3.35□□□□□ -1.87
RET3YPL010W SCEIP03882 235 aa3.34□□□□□ -1.87
RET3YPL010W YOL162WP0CF19 215 aa3.34□□□□□ -1.87
RET3YPL010W KRR1P25586 316 aaPredicted RBP3.34□□□□□ -1.87
RET3YPL010W PEX3P28795 441 aa3.34□□□□□ -1.87
RET3YPL010W GPI18P38211 433 aa3.34□□□□□ -1.87
RET3YPL010W YHR218WP38899 603 aa3.34□□□□□ -1.87
RET3YPL010W TRS85P46944 698 aa3.34□□□□□ -1.87
RET3YPL010W GPI8P49018 411 aa3.34□□□□□ -1.87
RET3YPL010W RMD9P53140 646 aaKnown RBP3.34□□□□□ -1.87
RET3YPL010W DSL1P53847 754 aa3.34□□□□□ -1.87
RET3YPL010W RSM23Q01163 450 aa3.34□□□□□ -1.87
RET3YPL010W CAC2Q04199 468 aa3.34□□□□□ -1.87
RET3YPL010W GTB1Q04924 702 aa3.34□□□□□ -1.87
RET3YPL010W SCW10Q04951 389 aa3.34□□□□□ -1.87
RET3YPL010W NNT1Q05874 261 aa3.34□□□□□ -1.87
RET3YPL010W USB1Q12208 290 aaKnown RBP3.34□□□□□ -1.87
RET3YPL010W TDH2P00358 332 aaKnown RBP3.33□□□□□ -1.88
RET3YPL010W TDH3P00359 332 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
RET3YPL010W NFT1P0CE68 1218 aa3.33□□□□□ -1.88
RET3YPL010W DSF1P0CX08 502 aa3.33□□□□□ -1.88
RET3YPL010W YNR073CP0CX09 502 aa3.33□□□□□ -1.88
RET3YPL010W DPM1P14020 267 aaKnown RBP3.33□□□□□ -1.88
RET3YPL010W YAK1P14680 807 aa3.33□□□□□ -1.88
RET3YPL010W MRPS28P21771 286 aa3.33□□□□□ -1.88
RET3YPL010W STE50P25344 346 aa3.33□□□□□ -1.88
RET3YPL010W PPA2P28239 310 aa3.33□□□□□ -1.88
RET3YPL010W IDH1P28834 360 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
RET3YPL010W IES6P32617 166 aa3.33□□□□□ -1.88
RET3YPL010W SUR1P33300 382 aa3.33□□□□□ -1.88
RET3YPL010W SRO77P38163 1010 aa3.33□□□□□ -1.88
RET3YPL010W ECM8P38246 354 aa3.33□□□□□ -1.88
RET3YPL010W CTR2P38865 189 aa3.33□□□□□ -1.88
RET3YPL010W MPM1P40364 252 aa3.33□□□□□ -1.88
RET3YPL010W FLX1P40464 311 aa3.33□□□□□ -1.88
RET3YPL010W LOH1P47055 219 aa3.33□□□□□ -1.88
RET3YPL010W YNL033WP53964 284 aa3.33□□□□□ -1.88
RET3YPL010W YNL019CP53975 284 aa3.33□□□□□ -1.88
RET3YPL010W YDC1Q02896 317 aa3.33□□□□□ -1.88
RET3YPL010W MSS11Q03825 758 aa3.33□□□□□ -1.88
RET3YPL010W PEX12Q04370 399 aa3.33□□□□□ -1.88
RET3YPL010W YDL114WQ07530 308 aa3.33□□□□□ -1.88
RET3YPL010W AIM6Q07716 390 aa3.33□□□□□ -1.88
RET3YPL010W MCH4Q08268 501 aa3.33□□□□□ -1.88
RET3YPL010W SYC1Q08553 188 aaPredicted RBP3.33□□□□□ -1.88
RET3YPL010W SIA1Q12212 622 aa3.33□□□□□ -1.88
RET3YPL010W WTM1Q12363 437 aaKnown RBP3.33□□□□□ -1.88
RET3YPL010W RAX2Q12465 1220 aa3.33□□□□□ -1.88
RET3YPL010W YDL007C-AQ2V2Q0 85 aa3.33□□□□□ -1.88
RET3YPL010W RPL39P04650 51 aa3.32□□□□□ -1.88
RET3YPL010W MSS18P08593 268 aa3.32□□□□□ -1.88
RET3YPL010W CMK2P22517 447 aa3.32□□□□□ -1.88
RET3YPL010W BUD5P25300 642 aaPredicted RBP3.32□□□□□ -1.88
RET3YPL010W CDC10P25342 322 aaKnown RBP3.32□□□□□ -1.88
RET3YPL010W ELO2P25358 347 aa3.32□□□□□ -1.88
RET3YPL010W RRP7P25368 297 aaPredicted RBP3.32□□□□□ -1.88
RET3YPL010W BOS1P25385 244 aa3.32□□□□□ -1.88
RET3YPL010W SIP1P32578 815 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms